Mcra024098.1
Basic Information
- Insect
- Melieria crassipennis
- Gene Symbol
- -
- Assembly
- GCA_963668005.1
- Location
- OY764963.1:94318214-94327742[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.2e-11 1.2e-07 31.9 0.0 1 38 629 667 629 672 0.89 2 4 1.6e-13 3.8e-10 39.9 0.0 2 39 684 721 683 724 0.94 3 4 1.9e-17 4.5e-14 52.5 0.0 1 45 738 783 738 783 0.98 4 4 5.9e-19 1.4e-15 57.4 0.0 1 43 790 833 790 835 0.96
Sequence Information
- Coding Sequence
- atgtacatacactcGATCTGTTATCCAATACGCGGCGCCGATTTGGGCACCAGCAACCGAGACACCGTCATACCTAAAAGACGTGGCAAGAGCACACCGGTTGGCATCACTCAGGGCCTTCCGGACGCTGCCAACGTAATAGCGAGCAGAATGCCTGTCGATATAGCGGCACGCGAGGCAACGGAACTTCGGAACGCAGGAAACAAAGAGAGACAGGAGACCATCAAGACAAACAAAGCGAGAGAATGGCAAGAACGATGGGACTCTTCAACGAAAAGACGCTCGACGCACACGCTCATTCCAGACATCGAGACCTGGCTAAAAAGAAAGCACGGTGAAACCAACTTTCACCTAACACAGGGTCTGCTTCGCACCGCCGAACAGCTGAAAATCAAAGGTCTCTGCGAAACAGCGGAGAATACGGACGATCTCAACGACGCCGCCACAGCGACAATCACCGTGTCGGAGAACATACAGCAGGCGGTCGTTGGTAACATTGTCAATGCTACGGTAGCGCCCGGCCAGCCCTCCCCCActacacagcagcagcagcaccagcagcagcaacagcagattGCGACAAATGCGGCAGTATTGTCGCACGGCCTCGCCAACGTAAACACTGCCAACGCACAGCAACTCGCGGTCGCAGCCGCCGGCGGTCAATTGGTCGCTGCCGGTCCACCctcgcaacagcagcaaatcgCGCGCAAGTCACGCGTTCGCAAGCGCTCCAAGTCGCCGGacctgcagcagcagcatcacaGCCAACAGCAGGCCCAGCAGCACCCACAAGCGATTCTAATACAAAATCAAAACCAGACGTCGATCGTTAGCCTGCAGCAGACCTCCTCCGGCAGTTACATACCCGTTTCGGGGGTGCAGACGGTAACCACTAGCGTCGCTGGCCAGCCGCAGAACGTAGTCACCGGCGACGACTCGGACACGGACAAGCCGTCGCTGCAGAAGATCTGCAAGACGGAAGCGGCGTCCGCGTCACCCGCATCCAGCAACTCCGGTTCGGCATCGAATAATGCAGGCGGCGTAACGACCGTAGCAGCACCGGGCACCGCGATCGTGACGCAAATTGTAGTAGCACGCGACGTAAAAGATAAAAATATGACTAGTTTAGGAATGGGCATGAATGGTGGAATTCTCGGAGTGCCAATGGGCTTTTTAGATTTCGCACCTGAACCACCAGCTCCATCAGCGACACCAGTTACCGTTACCGAACACGTGGACTTATCCTGCAACCCCAGCACCGACACACGTGATTTATCAAATCCCACCGAACCGCTCGATATCGACAATCATCTGGCTCAGCACATGATACAACGGCTCGATCAATCTCCAATGCATACCATACACCATCAGACCGGCGACGAGAGCAACTCGAATTTGGTGCAGCACATCAAAAGCGAAGTGATCGAAGctaaacagcagcaacaacagcaacagcagcagcaacaacagcagcagcaacagcaccatCAATCGCAGCAGCACCAATTGCACGCTCAGCAGCTATCGCAAGGACAATCccagcaacagcaccaacaacaacaacaggtgcATCAACAGCAAACtcaacaacagcaccagcaacatcagcaacaacaagcgcAAACGCATCAAGAGATATCCGGTGCGACCGTAATGGAGATTGATCCAAGCCAAATAAAACACGAGCCAGGCATGATTATAACGCCCGAAATTGTGAATATGATGACCACAGGGCATATGGATATGTATAATTCCGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCTCCGAACGATCAAAATGAGCCACATTACACCAATTTGGACCAACAACATGGCGATATTAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCGGCTTTAGATGCATTGAAGAATCAAAATATGAGCCTGACGAAGGCATCCGTCACGTACGGCATCCCGTCGACCACTCTCTGGCAGCGTGCTCATCGCATGGGCATCGAAACGCCAAAGAAGGAAGGTGGTACAAAATCATGGAACGAAGATTCCTTAAATAATGCCTTGGAAGCATTGCGCTCCGGACAGATATCGGCGAACAAGGCATCGAAAGCCTTTGGTATACCCTCGTCGACGCTGTACAAGATAGCACGTCGCGAGGGTATTCGCCTGGCAGCGCCCTTCAATGCCGCTCCTACAACATGGACTCCAGAAGATTTAGAGCGTGCATTGGAGGCGATACGCGCCGGTCATACGTCCGTCCAAAAAGCGAGTGCTGAATTTGGCATACCGACAGGAACACTTTATGGGCGCTGCAAGCGCGAAGGCATTGAATTGTCGCGTTCGAATCCGACGCCATGGTCCGAGGATGCAATGAACGAGGCGCTAAATTCAGTTCGCATCGGCCAGATGTCCATCAACCAGGCGGCGATTCATTACAATCTGCCCTACAGCTCCCTGTACGGACGCTTCAAGCGCGGCAAGTACGATGTGGCCAACACGAGCGGCACATCGATCAATAACACGACCGGCAATACATCCGGCAGCATCGAGATTATTGAACACAGTCAAGAGAACTCGTTGCACATGTTTCAGCAACAGTTCCAGTACAGTCCATCGCCGCATCCGCAATCGCAGCAGCACGGCGGTGGCGGCCAGCCGCAAACGCCGCAGCATCTGCAACAGCATGTGGTGCACATTCAGCAGCCGCAACAGCATCACCAGCAACAGGCGCAcgctcagcagcagcagcaacatatCCAGCAGCAGGACGTGGTCACGTCGAGCAGTCAGGTGGCACACAGCAGTGGCGCCGCtggccaacagcagcagcaaattcaGCAGATCTATCACCATCACAGCACGCCGGAGAGAAGTTGA
- Protein Sequence
- MYIHSICYPIRGADLGTSNRDTVIPKRRGKSTPVGITQGLPDAANVIASRMPVDIAAREATELRNAGNKERQETIKTNKAREWQERWDSSTKRRSTHTLIPDIETWLKRKHGETNFHLTQGLLRTAEQLKIKGLCETAENTDDLNDAATATITVSENIQQAVVGNIVNATVAPGQPSPTTQQQQHQQQQQQIATNAAVLSHGLANVNTANAQQLAVAAAGGQLVAAGPPSQQQQIARKSRVRKRSKSPDLQQQHHSQQQAQQHPQAILIQNQNQTSIVSLQQTSSGSYIPVSGVQTVTTSVAGQPQNVVTGDDSDTDKPSLQKICKTEAASASPASSNSGSASNNAGGVTTVAAPGTAIVTQIVVARDVKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQHMIQRLDQSPMHTIHHQTGDESNSNLVQHIKSEVIEAKQQQQQQQQQQQQQQQQHHQSQQHQLHAQQLSQGQSQQQHQQQQQVHQQQTQQQHQQHQQQQAQTHQEISGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSEDSMMIANGSPNDQNEPHYTNLDQQHGDIKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSGTSINNTTGNTSGSIEIIEHSQENSLHMFQQQFQYSPSPHPQSQQHGGGGQPQTPQHLQQHVVHIQQPQQHHQQQAHAQQQQQHIQQQDVVTSSSQVAHSSGAAGQQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01378309; iTF_00922022; iTF_00199787; iTF_00922207; iTF_00899457; iTF_01315425; iTF_01313724; iTF_01398403; iTF_00892647; iTF_00655241; iTF_00741769; iTF_00997641; iTF_01376553; iTF_00760010; iTF_00259691; iTF_00370891; iTF_01165452; iTF_00716557; iTF_01109263; iTF_01201519; iTF_01399375; iTF_00435440; iTF_01260913; iTF_01314579; iTF_00350100; iTF_00900500; iTF_01074388; iTF_01176852; iTF_01235639; iTF_01427393; iTF_01137915; iTF_00975516; iTF_01259132; iTF_01397340; iTF_01174142; iTF_01236574; iTF_01237570; iTF_01373982; iTF_00258784; iTF_01563014; iTF_01562811; iTF_01563677; iTF_00189862; iTF_00192007; iTF_00192906; iTF_00192738; iTF_00193482; iTF_00193677; iTF_00191283; iTF_00191455; iTF_00190591; iTF_00190763; iTF_01045387; iTF_01055147; iTF_01174987; iTF_01231500; iTF_00967086; iTF_00091090; iTF_01189305; iTF_01505298; iTF_00817331; iTF_00679396; iTF_00816464; iTF_00082841; iTF_00081116; iTF_00082048; iTF_00303737; iTF_00303895; iTF_00797657; iTF_01357849; iTF_00992465; iTF_01470425; iTF_01132838; iTF_01019354; iTF_01019537; iTF_01374877; iTF_01375042; iTF_01404800;
- 90% Identity
- -
- 80% Identity
- -