Pfun018087.1
Basic Information
- Insect
- Phania funesta
- Gene Symbol
- -
- Assembly
- GCA_963932375.1
- Location
- OZ010654.1:75838953-75851651[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.3e-11 1.2e-07 32.1 0.0 1 38 528 566 528 571 0.89 2 4 1.7e-13 3.7e-10 40.1 0.0 2 39 583 620 582 623 0.94 3 4 2e-17 4.4e-14 52.7 0.0 1 45 637 682 637 682 0.98 4 4 6e-19 1.3e-15 57.5 0.0 1 43 689 732 689 734 0.96
Sequence Information
- Coding Sequence
- atgAATTCCTTGGCTCCTTATTATGACAACGAGGACAACGACGTGCATACCTACgGTCTTTTGCGCACCGCTGAACAGTTAAAAATCAAAGGTCTTTGTGAGACAGCAGAAAATGCCGATGATCTGAATGATGCGGCCACAGCAACAATAACAGTATCGGAAAATATACAGCAAGCTGTCGTTGGTAATATTGTCAATACCACAGTAGTGCCGGGCCAGCAATCGCCTCCTATACCCCACCAACAACATCAGCCACAACAGCAtcaacaccagcaacaacaattaaCCACTACCGCCGTTTTAAGTCCCGGAAGTGCTCAACAGCTAGCAGTTGCCGGACAATTGGTAACCACAACACCTGCCACAACGCCCCAACAGCAACAAAGAAAATCCAGAGTACGTAAACGTTCAAAATCACCCGACCTACAgttgcaacagcagcagcaccatcaacagcaacaaaatcaaCAGCATCCACAGGcaatattaatacaaaatcaaaatcaagCTGCTATTGTCAGTCTACAACAGACATCGGCTGGTAACTATATACCCGTATCGGGGGTTCAAACGGTAACTACCAGTGTAGCGGGTGGCCAACATCAGCAACAGCATACCACAATTGTAACAGCGGACGATTCGGATTCGGATAAACCTTCGCTGCAAAAGATTTGCAAAACTGAAGCGTCTTCTGCTTCACCGGCGTCCTCTTCATCGGCATCAGCATCAAATAATGCTGGTGGCGTAACTGCCGTCACAGCATCGGGAACAGCGATCGTAACACAAATTGTAGTAGCAAGAGAcggaaaagataaaaatatgacTAGTTTAGGCATGGGAATGAATGGTGGCATTCTTGGAGTCCCTATGGGCTTTTTAGATTTTGCCCCCGAACCTCCGGCACCCTCAGCAACACCTGTCACGGTTACTGAACACGTAGATTTATCCTGTAACCCAAGCACGGATACCCGAGATTTATCAAATCCCTCAGAACCGCTCGATATCGACAATCATTTGGCTCAGCACATGATACAACGGCTCGATCAATCTCCCATGCATACCATACATCATCAGACCGGTGACGAATCGAATTCAAATCTGGTTCAACATATAAAAAGCGAAGTTATTGATgccaaacaacagcaacaggcTCAACAACAACAAGCCGCTGCAGTCGCTCATCATCAAGCTCAGCAACAACAGATGCATGCTCATCAATTAGCTGCAGCGCAAGGACAAGcacatcagcaacaacaacagcaggcagctCATCAACAGCAACAGGCAcatcaacaacatcaacagcaacaTGCCCACCAGCAGCATCATCAGGAGATTACCGGAGCCACCGTTATGGAGATTGATCCGAGCCAAATTAAACATGAACCGGGCATGATAATAACACCGGAAATTGTAAATATGATGACGACAGGACATATGGATATGTACAATTCCGATACGAGCGATGATTCAATGATGATTGCCAACGGTTCACCACACGATCAAAGTGAACCCCATTACACAAACTTAGATCAACAGCATGGCGATATGAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCACTGAAGAATCAAAACATGAGCCTGACGAAAGCATCCGTAACCTATGGCATCCCCTCTACCACCCTTTGGCAAAGGGCCCACCGTATGGGCATTGAAACACCCAAGAAGGAAGGAGGTACGAAATCGTGGAATGAAGACTCGCTTAACAATGCTCTGGAGGCTCTACGTTCGGGTCAAATATCAGCCAACAAGGCATCGAAAGCCTTTGGTATACCTTCGTCGACGTTGTACAAAATAGCACGACGTGAAGGTATACGATTGGCAGCGCCGTTTAATGCCGCCCCCACCACCTGGACGCCGGAGGATTTAGAAAGGGCCCTGGAAGCAATACGTGCGGGTCATACATCGGTACAGAAGGCAAGTGCAGAATTTGGTATACCCACAGGCACATTGTACGGTCGCTGTAAACGTGAGGGCATCGAATTATCCCGTTCGAATCCAACACCCTGGTCTGAAGATGCAATGAACGAAGCTTTAAATTCTGTGCGCATTGGCCAAATGTCTATAAATCAAGCTGCTATCCATTATAATCTACCGTATAGTTCTTTATATGGTCGCTTTAAGCGCGGCAAATATGATGTGGCCAACACAAGCGGTACTTCCATTAATAATACATCTGGCAATACATCCGGTAGTATTGAAATAATTGAACATAGTCAAGAGAATTCctTGCCTATGTTTCAGCAACAATTCCAATATAGTCCATCGCCGCATCAGCAACAACACGGTGGCAGTAGTACACCGCAACAAAGTCAAACGCCACAGCATCTACAGCAACATGTTGTGCATAtacaacaacatcatcagcaacaGACCCAACATGCGCAACATATCCAACAGCAGGACGTTGTAACATCGTCAagccaacagcaacaacatgcCAGTAATGCGGCAGCCtcccaacaacaacagcaacttcAGCAAATTTATCATCATCACAGTACACCCGAGAGAAGTTGA
- Protein Sequence
- MNSLAPYYDNEDNDVHTYGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNTTVVPGQQSPPIPHQQHQPQQHQHQQQQLTTTAVLSPGSAQQLAVAGQLVTTTPATTPQQQQRKSRVRKRSKSPDLQLQQQQHHQQQQNQQHPQAILIQNQNQAAIVSLQQTSAGNYIPVSGVQTVTTSVAGGQHQQQHTTIVTADDSDSDKPSLQKICKTEASSASPASSSSASASNNAGGVTAVTASGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPSEPLDIDNHLAQHMIQRLDQSPMHTIHHQTGDESNSNLVQHIKSEVIDAKQQQQAQQQQAAAVAHHQAQQQQMHAHQLAAAQGQAHQQQQQQAAHQQQQAHQQHQQQHAHQQHHQEITGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSDDSMMIANGSPHDQSEPHYTNLDQQHGDMKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSGTSINNTSGNTSGSIEIIEHSQENSLPMFQQQFQYSPSPHQQQHGGSSTPQQSQTPQHLQQHVVHIQQHHQQQTQHAQHIQQQDVVTSSSQQQQHASNAAASQQQQQLQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00258784;
- 80% Identity
- -