Ptie079422.1
Basic Information
- Insect
- Phaonia tiefii
- Gene Symbol
- -
- Assembly
- GCA_963931995.1
- Location
- OZ008371.1:147528063-147543082[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-10 3.6e-07 32.0 0.0 1 38 546 584 546 589 0.89 2 4 5.8e-13 1.1e-09 40.1 0.0 2 39 601 638 600 641 0.94 3 4 6.9e-17 1.3e-13 52.6 0.0 1 45 655 700 655 700 0.98 4 4 1.4e-18 2.8e-15 58.0 0.0 1 44 707 751 707 752 0.96
Sequence Information
- Coding Sequence
- ATGAATATTAGAAGGAACTTCGAGGGTCTCCTACGTACCGCTGAACAGCTGAAAATCAAAGGTCTCTGTGAAACCGCCGAAAACGCTGATGATCTAAATGATGCAGCCACAGCCACAATAACCGTATCCGAAAATATACAACAAGCGGTTGTTGGTAATATTGTCAATGCCACAGTAGTACCCGGCCAAGTATCACCGCCCATACCACAGCAACAtcatcaacagcaacagcagcagcaacagcagcagcaacaacagcaccagcagcagcaacaacagcagcaacaacagcaacaattggcCAATACTGCTGTTTTGACACACGCCGTCAGTCCTAACAGTTCCCTACAATTGCCAGTCTCTGGACAATTGGTTACCTCCACGCCGCTCTCGTCCCATCAACAACAACAGATTGGTGGTCGTAAGTCAAGGATACGCAAACGTTCCAAATCACCGGATCTACAACTgcagcaacatcatcaacaacagcagcaacagaatCAACAGCAACACCCCCAGGCCATTCTAATACAGAATCAAAATCAAGCGGCTATTGTGAGTCTACAACAGACGTCAGCTGGCAATTATATACCGGTGTCCGGTGTCCAAACGGTAACGACAAGTGTTGCTAGTGGTCAGGCACAACAGCAGGGCGGTGGCACGACCATAGTAACGACTGGTGACGATTCCGATTCGGAAAAACCGTCATTGCACAAAATCTGCAAAACTGAGACATCGTCCGCTTCGCCAGCGTCAGTTTGTTCGGCATCGGCGTCAAATAATGCTGGTGGTGTAACAACAGTAGCAGCACCAGGAACAGCAATTGTAACACAAATTGTAGTAGCTAGAGACGGAAAAGATAAAAATATGACTAGTTTAGGCATGGGAATGAATGGTGGCATTCTGGGAGTACCTATGGGTTTCTTAGATTTTGCACCAGAACCACCGGCACCATCAGCGACACCAGTTACGGTTACAGAACATGTAGATTTGTCATGTAACCCCAGCACGGATACCAGAGATTTATCAAATCCCTCAGAACCGCTCGATATCGACAATCATTTGGCCCAACACATGATCCAACGGCTCGATCAATCTCCCATGCACTCTATGCACCATCAGACCGGTGACGAATCCAATTCGAATCTGGCCCAGCACATAAAAAGTGAAGTCATCGATGCCAAACAACAGCAACAGGTCCAGCAGCATCAACAGGCAGCGGCCGCCCACCATCAGGCGCAACAGCAACAGTTGCATGCCCAGCAATTGGCTGCGGCGCAGAGCCAAAGCCATCAACAGCAGGCccaccagcagcaacaacagcagcaggcacaccagcaacagcaacatcatcaGGCCCACCAGCAGCAACAGCATCATCAGGATATGACGGGGGCCACAGTGATGGAGATTGATCCGAGCCAAATTAAACATGAGCCGGGCATGATAATAACACcggaaattgtaaatatgatgACCACCGGGCACATGGACATGTATAATTCCGATACGAGCGATGACTCAATGATGATTGCCAATGGCTCACCACATGATCAAAATGAACCGCATTATACCAATTTAGATCAGCAGCATGGTGGCGATATGAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAACATGAGTCTGACGAAAGCATCCGTTACCTATGGCATCCCCTCCACCACCCTATGGCAACGTGCTCATCGCATGGGTATCGAGACCCCCAAGAAGGAAGGAGGCACGAAATCATGGAATGAAGATTCTCTGAACAATGCTTTGGAAGCCCTACGCTCTGGACAAATATCGGCCAACAAAGCATCGAAGGCCTTCGGCATACCTTCATCGACGCTCTATAAGATAGCACGACGTGAGGGTATACGATTGGCAGCGCCATTCAATGCCGCCCCAACAACATGGACCCCCGAGGATTTGGAGCGAGCGTTGGAGGCAATACGTGCAGGGCATACATCCGTTCAGAAGGCAAGTGCTGAATTTGGTATACCAACAGGCACTCTATATGGCCGCTGTAAACGTGAAGGCATCGAATTGTCACGTTCAAATCCTACTCCATGGTCTGAAGATGCTATGAATGAAGCTTTGAATTCAGTGCGCATTGGGCAAATGTCGATCAATCAAGCTGCTATTCATTACAATTTACCCTATAGCTCATTGTATGGCCGTTTTAAACGGGGCAAATATGATGTGGGCAATACCAGTGGTACTGCCATCAATAATGCGTCGGGCAATACATCGGGAAGCATTGAAATTATCGAGCATAGTCAAGAGAATTCGTTGCCTATGTTTCAGCAACAATTCCAATATAGTCCATCACCGCATCAGCAACATGGCGGTAATACAACACCGCAACAAAGCCAAACACCACAGCATCTACAGCAACATGTAGTGCAtatacagcagcagcaacatcatcagcagcaacagcagcccCAACATGCGCAACATATCCAACAGCAGCAAGATGTTGTCACCTCATCCAGTCAACAACAGCAAGTTCAACAACAGCACGCCAGCAATTCAGCCGTTGCGGCAGCGGCAGCCGCTGCTGCGGCCacgcaacagcagcagcaacagattCAACAGATCTATCATCATCACAGTACACCAGAGAGAAGTTGA
- Protein Sequence
- MNIRRNFEGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATVVPGQVSPPIPQQHHQQQQQQQQQQQQQHQQQQQQQQQQQQLANTAVLTHAVSPNSSLQLPVSGQLVTSTPLSSHQQQQIGGRKSRIRKRSKSPDLQLQQHHQQQQQQNQQQHPQAILIQNQNQAAIVSLQQTSAGNYIPVSGVQTVTTSVASGQAQQQGGGTTIVTTGDDSDSEKPSLHKICKTETSSASPASVCSASASNNAGGVTTVAAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPSEPLDIDNHLAQHMIQRLDQSPMHSMHHQTGDESNSNLAQHIKSEVIDAKQQQQVQQHQQAAAAHHQAQQQQLHAQQLAAAQSQSHQQQAHQQQQQQQAHQQQQHHQAHQQQQHHQDMTGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSDDSMMIANGSPHDQNEPHYTNLDQQHGGDMKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVGNTSGTAINNASGNTSGSIEIIEHSQENSLPMFQQQFQYSPSPHQQHGGNTTPQQSQTPQHLQQHVVHIQQQQHHQQQQQPQHAQHIQQQQDVVTSSSQQQQVQQQHASNSAVAAAAAAAAATQQQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00679396;
- 80% Identity
- -