Bbay027117.1
Basic Information
- Insect
- Bellardia bayeri
- Gene Symbol
- -
- Assembly
- GCA_950370525.1
- Location
- OX493268.1:61109616-61126371[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-10 1.3e-07 32.0 0.0 1 38 542 580 542 585 0.89 2 4 4.5e-13 4e-10 40.1 0.0 2 39 597 634 596 637 0.94 3 4 5.4e-17 4.8e-14 52.6 0.0 1 45 651 696 651 696 0.98 4 4 1.6e-18 1.5e-15 57.5 0.0 1 43 703 746 703 748 0.96
Sequence Information
- Coding Sequence
- ATGATTGATCTAATTAGATGCTTGCAaGGTCTTTTACGCACCGCTGAACAGTTAAAAATCAAAGGTCTTTGTGAGACAGCAGAGAATGCCGATGATCTGAATGATACGGccacagcaacaataacagtaTCAGAGAATATACAGCAAGCTGTCGTTGGTAATATTGTTAATGCCACAGTAGTGCCGGGTCAGCAGTCTCCTACTATACCCCACCAGCAACATCAGCCACAGCAGCAGACGCAACAGcagcaccaacaacaacagcagcatcagcaacaacaattaaCCACTACCGCCGTATTAAGTCCGGGAAGTGCTCAACAGTTAGCCGCCACAGGACAATTGGTAACATCAACACCCGCCACAACGCCCCagcaacatcagcaacaacaacgaaaaTCCCGAGTACGCAAACGTTCAAAATCGCCCGACTTACAgctgcaacaacagcagcaccaTCAACAGCAACAGAATCAACAGCATCCACaggcaatattaatacaaaatcaaaatcaagcTGCTATTGTCAGTCTACAACAGACGTCGGCCGGTAATTATATACCAGTATCAGGAGTTCAAACGGTAACCACCAGTGTAGCGGGTggccaacagcagcagcaacaacacacCACCATTGTAACAGCGGACGATTCTGATTCGGATAAACCGTCActgcaaaagatttgtaaaACTGAAGCAGCATCAGCTTCACCGGCGTCCACTTCATCGGCATCAGCATCAAATAATGCTGGTGGTGTAACTGCGGTCACAGCATCGGGAACAGCGATCGTAACACAAATTGTAGTAGCAAGAGACGgaaaagataaaaatatgaCTAGTTTAGGCATGGGAATGaatGGTGGCATTCTAGGAGTCCCAATGGGCTTTTTAGATTTTGCCCCCGAACCACCGGCACCCTCAGCAACACCTGTCACGGTTACAGAACACGTAGATTTATCCTGTAACCCCAGCACGGATACCAGAGACTTATCAAATCCCTCAGAACAGCTCGATATCGACAATCATTTAGCCCAGCACATGATACAACGGCTCGATCAATCTCCCATGCACACCATACATCATCAGACCGGCGACGAATCGAATTCGAATCTAGTTCAGCATATAAAAAGTGAAGTAATCGATGccaaacagcaacagcagcaggctcagcagcagcaacaacaagccGCCGCTGTAGCCGCTCACCATCAAGCTCAACAGCAACAGTTGCATGCACAACAATTAGCAGCAGCGCAGGGACAAacacatcagcaacaacaacagcaggcAGCccatcagcaacagcagcagcaacaacagcagcaggcacatcaacaacatcatcagcaacaggCCCACCAGCAGCATCATCAGGAAATAACCGGAGCCACCGTTATGGAGATTGATCCGAGCCAAATAAAACATGAGCCGGGCATGATAATAACACCGGAAATTGTAAATATGATGACGACAGGACATATGGACATGTACAATTCCGATACGAGCGATGATTCAATGATGATTGCCAACGGTTCACCACATGATCAAAATGAACCTCATTACACGAATTTAGATCAACAGCATGGCGATATGAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCACTGAAGAATCAAAACATGAGCCTGACGAAAGCATCCGTTACCTATGGCATCCCCTCAACCACCCTGTGGCAAAGGGCCCACCGCATGGGCATCGAAACACCGAAGAAGGAAGGAGGTACCAAATCATGGAACGAAGACTCGCTCAACAATGCACTGGAGGCTTTGCGTTCGGGACAAATATCGGCCAACAAAGCATCGAAAGCCTTTGGTATACCTTCGTCGACGTTGTATAAAATAGCACGACGTGAAGGTATACGATTGGCAGCGCCTTTTAATGCCGCCCCAACCACCTGGACGCCGGAAGATTTGGAAAGGGCCCTGGAAGCAATACGTGCTGGCCATACATCGGTACAGAAGGCAAGTGCAGAATTTGGTATACCCACAGGCACATTATATGGTCGTTGTAAACGTGAGGGCATCGAATTATCCCGTTCAAATCCTACACCTTGGTCAGAAGATGCTATGAATGAAGCTTTAAATTCTGTGCGCATTGGCCAAATGTCTATAAATCAAGCTGCTATCCATTATAATTTACCGTACAGTTCTTTATATGGTCGCTTTAAACGCGGCAAATATGATGTGGCCAATACCAGCGGTACTTCCATTAATAATACATCGGGCAATACCTCCGGTagtattgaaattattgaaCACAGTCAAGAGAATTCGttgcCTATGTTTCAGCAACAATTCCAATATAGTCCATCGCCGCATCAGCAACAGCACGGTGGCAGTAGTACACCGCAGCAAAGTCAAACGCCACAGCATCTGCAGCAGCATGTTGTGCATATACAGCAACAGCATCATCAACAACAGACCCAACATGCGCAACATATCCAACAGCAAGATGTTGTAACCTCGTCAAGTCAACAACAAGTCCAACAGCAGCAACATGCCGGCAATTCGGCAGCctcccaacaacaacaacagcagcagcagcaacaacaacaaattcaacaaatttacCATCATCACAGTACACCCGAGAGAAGTTGA
- Protein Sequence
- MIDLIRCLQGLLRTAEQLKIKGLCETAENADDLNDTATATITVSENIQQAVVGNIVNATVVPGQQSPTIPHQQHQPQQQTQQQHQQQQQHQQQQLTTTAVLSPGSAQQLAATGQLVTSTPATTPQQHQQQQRKSRVRKRSKSPDLQLQQQQHHQQQQNQQHPQAILIQNQNQAAIVSLQQTSAGNYIPVSGVQTVTTSVAGGQQQQQQHTTIVTADDSDSDKPSLQKICKTEAASASPASTSSASASNNAGGVTAVTASGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPSEQLDIDNHLAQHMIQRLDQSPMHTIHHQTGDESNSNLVQHIKSEVIDAKQQQQQAQQQQQQAAAVAAHHQAQQQQLHAQQLAAAQGQTHQQQQQQAAHQQQQQQQQQQAHQQHHQQQAHQQHHQEITGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSDDSMMIANGSPHDQNEPHYTNLDQQHGDMKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSGTSINNTSGNTSGSIEIIEHSQENSLPMFQQQFQYSPSPHQQQHGGSSTPQQSQTPQHLQQHVVHIQQQHHQQQTQHAQHIQQQDVVTSSSQQQVQQQQHAGNSAASQQQQQQQQQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00258784;
- 80% Identity
- -