Tlur010855.2
Basic Information
- Insect
- Tachina lurida
- Gene Symbol
- -
- Assembly
- GCA_944452685.1
- Location
- CALYBZ010000519.1:1030967-1052673[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.3e-11 1.3e-07 32.1 0.0 1 38 534 572 534 577 0.89 2 4 2.3e-13 4.1e-10 40.1 0.0 2 39 589 626 588 629 0.94 3 4 2.7e-17 4.9e-14 52.7 0.0 1 45 643 688 643 688 0.98 4 4 8.2e-19 1.5e-15 57.5 0.0 1 43 695 738 695 740 0.96
Sequence Information
- Coding Sequence
- ATGCAGAGTGAGACAATTGACTACCGCCTAGGACATCGCAATGTTAAAATAGGTCTTTTGCGCACCGCTGAACAGTTAAAAATTAAAGGTCTTTGCGAGACAGCAGAAAATGCCGATGATCTTAACGATACGGCCACAGCAACAATAACAGTATCAGAGAATATACAACAAGCTGTCGTTGGTAATATTGTCAATGCAACAGTAGTGCCGGGACAGCAATCTCCTCCAATACCCCACCAACAACATCAGCCACAACAGCAGCAGCAACAACAGCAGCACCAACACCAGCAACAGCAACAATTAACAACTACCGCCGTTTTAAGTCCCGGAAGTGCTCAACAGTTAGCAGTTGCCGGACAATTGGTAACCTCAACGCCTGCCACAACACCCCAACAGCAGCAACAGCAGCAACAACGAAAATCCAGAGTACGCAAACGTTCAAAATCGCCGGACCTACAGTTGCAACAGCAACAGCAACAGCACCATCAGCAACAGAATCAACAGCACCCACAGGCAATATTAATACAAAATCAAAATCAAACTGCCATTGTCAGTCTACAACAGACATCGGCTGGTAACTATATACCCGTATCGGGCGTACAAACGGTAACCACCAGCATAGCCGGTGGCCAGCAGCAACAACATACCACCATCGTAACAGCGGACGATTCGGATTCGGATAAACCCTCCCTGCAAAAGATCTGCAAAACTGAGGCGTCTTCAGCTTCACCGGCGTCCACTTCATCGGTATCGGCAACAAATAATGCTGGTGGCGTAACTGCAGTGACAGCATCGGGAACAGCGATCGTAACACAAATTGTAGTAGCAAGAGACGGAAAAGATAAAAATATGACTAGTTTAGGCATGGGAATGAATGGTGGCATTCTAGGAGTCCCTATGGGCTTTTTAGATTTTGCCCCCGAACCACCGGCACCCTCAGCAACACCTGTCACGGTTACAGAACATGTAGATTTATCTTGTAACCCCAGCACGGACACCCGAGATCTATCAAATCCATCAGAACCGCTCGATATCGACAATCATTTGGCTCAGCACATGATACAACGGCTCGATCAATCTCCCATGCATACCATACATCATCAGACTGGCGACGAATCAAATTCGAATCTGGTCCAGCATATAAAAAGCGAAGTAATTGATGCCAAACAACAGCAACAGGTTCAACAGCACCAACAAGCCGTTGCCCATCATCAGGCTCAGCAGCAACAGTTGCATGCACAACAATTAGCAGCGCAGGGGCAAACACATCAACAGCAGCAGGCAGCCCATCAGCAACAGCAACAGGCACATCAACATCACCAACAGCAGGCCCACCAGCAGCATCACCAAGATATCACCGGAGCCACCGTTATGGAGATTGATCCGAGCCAAATAAAACATGAACCGGGAATGATAATAACACCGGAAATTGTAAATATGATGACGACAGGGCATATGGACATGTACAATTCCGATACGAGCGATGATTCAATGATGATTGCCAACGGTTCACCACACGATCAAAATGAACCCCATTACACAAATTTAGATCAACAGCATGGCGATATGAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAACATGAGCCTGACGAAAGCATCCGTTACCTATGGCATCCCCTCAACCACGCTCTGGCAAAGGGCCCACCGCATGGGCATCGAAACACCGAAGAAGGAAGGAGGCACGAAATCATGGAACGAAGACTCGCTAAACAATGCTCTGGAGGCTCTGCGTTCGGGACAAATATCGGCCAACAAGGCATCGAAAGCCTTTGGTATACCTTCGTCGACGTTGTATAAAATAGCACGACGTGAGGGTATACGATTGGCAGCGCCGTTCAACGCCGCCCCCACCACCTGGACTCCCGAAGATCTGGAAAGGGCCTTGGAAGCAATACGCGCGGGTCATACATCGGTACAGAAGGCAAGTGCAGAATTTGGTATACCCACAGGCACATTGTACGGTCGTTGCAAACGTGAAGGCATTGAATTATCTCGTTCAAATCCAACGCCATGGTCTGAAGATGCTATGAATGAAGCTTTAAATTCTGTGCGCATTGGCCAAATGTCTATTAATCAAGCTGCTATCCACTATAATCTACCCTACAGTTCTTTATATGGTCGCTTTAAACGGGGCAAGTATGATGTGGCCAATACAAGCGGTACTTCCATAAATAATACATCGGGCAATACCTCCGGTAGTATTGAAATCATTGAACATAGTCAAGAGAATTCTTTGCCTATGTTTCAGCAACAATTCCAATATAGCCCATCGCCGCATCAGCAACAGCACGGCGGCAGTAGTACACCGCAACAAAGTCAAACGCCACAGCATCTACAGCAACATGTTGTGCACATACAGCAACACCATCAGCAACAGACCCAACATGCGCAACATATCCAACAGCAAGATGTTGTAACATCGTCAAGCCAACAGCAAGTCCAACAGCAGCAGCATGCCAGTAATGCGGCAGCCTCCCAACAACAGCAAATTCAACAAATCTATCATCATCACAGTACACCCGAAAGAAGTTGA
- Protein Sequence
- MQSETIDYRLGHRNVKIGLLRTAEQLKIKGLCETAENADDLNDTATATITVSENIQQAVVGNIVNATVVPGQQSPPIPHQQHQPQQQQQQQQHQHQQQQQLTTTAVLSPGSAQQLAVAGQLVTSTPATTPQQQQQQQQRKSRVRKRSKSPDLQLQQQQQQHHQQQNQQHPQAILIQNQNQTAIVSLQQTSAGNYIPVSGVQTVTTSIAGGQQQQHTTIVTADDSDSDKPSLQKICKTEASSASPASTSSVSATNNAGGVTAVTASGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPSEPLDIDNHLAQHMIQRLDQSPMHTIHHQTGDESNSNLVQHIKSEVIDAKQQQQVQQHQQAVAHHQAQQQQLHAQQLAAQGQTHQQQQAAHQQQQQAHQHHQQQAHQQHHQDITGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSDDSMMIANGSPHDQNEPHYTNLDQQHGDMKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSGTSINNTSGNTSGSIEIIEHSQENSLPMFQQQFQYSPSPHQQQHGGSSTPQQSQTPQHLQQHVVHIQQHHQQQTQHAQHIQQQDVVTSSSQQQVQQQQHASNAAASQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00258784;
- 80% Identity
- -