Basic Information

Insect: Zeugodacus tau
Gene Symbol: -
Assembly: GCA_031772095.1
Location: CM062652.1:24227445-24236906[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 5.4 5.3e+03 -2.1 0.5 16 24 385 393 384 394 0.86

2 5 1.1e-10 1.1e-07 32.1 0.0 1 38 505 543 505 548 0.89

3 5 3.3e-13 3.3e-10 40.2 0.0 2 39 560 597 559 600 0.94

4 5 4e-17 3.9e-14 52.7 0.0 1 45 614 659 614 659 0.98

5 5 1.1e-18 1.1e-15 57.7 0.0 1 43 666 709 666 711 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	5.4	5.3e+03	-2.1	0.5	16	24	385	393	384	394	0.86
2	5	1.1e-10	1.1e-07	32.1	0.0	1	38	505	543	505	548	0.89
3	5	3.3e-13	3.3e-10	40.2	0.0	2	39	560	597	559	600	0.94
4	5	4e-17	3.9e-14	52.7	0.0	1	45	614	659	614	659	0.98
5	5	1.1e-18	1.1e-15	57.7	0.0	1	43	666	709	666	711	0.96

Sequence Information

Coding Sequence: ATGCATATGGATGGATGTAAGGGTTTATTACGTACAGCCGAACAGCTTAAAATCAAGGGACTTTGTGAGACAGCCGAAAATACAGACGATCTAAACGATTCGGCTACAGCTACAATCACCGTATCGGAGAATATACAGCAAGCCGTTGTTGGTAATATCGTGAATGCTACAGTAGCAACGGGTCAACTCTCACCCAATATACCACATCaatcgcaacagcaacaacaacaacagatcaCCACTAATACGGCGGTGCTCACGCATAATATTGGCAACGTGACTACAGCAAATACACAACAAATTGGATCTGCCACAGCGAATGTCGCTGGACAGTTAGTTAGTGCGGGCACTGcggtacaacagcaacaacttggACGTAAATCTCGTGTACGTAAGCGTTCCAAGTCACCAGATATACAACATCAAGTACAGAGTACACAACATCCACAAACTATTTTAATACAGAATCAAAATCAAGCCGCTATCGTTAGTTTACAACAGACGTCATCTGGTAATTATATACCGGTATCCGGTGTACAAACGGTTAGCACTAGCGGTGTTGGGCAACAGCAGACGGTAATCACTGGTGACGATTCGGATACGGATAAACCGTCGAAAATCTGTAAGACAGAAACAGCGTCAGCGTCACCGACGTCCAGCGTATCTGGTGTATCGGGCACGAATAATGCTGGAAGCGTAACGACAGTTGCAGCACCAGGTACAGCGATTGTTACGCAGATTGTAGTCGCACGAGACGGCAAAGATAAAAATATGACTAGTTTAGGAATGGGAATGAATGGCGGAATTCTTGGAGTGCCAATGGGCTTTTTAGATTTTGCACCAGAACCACCAGCACCATCAGCCACACCTGTAACAGTAACGGAACATGTCGATTTATCATGTAATCCTAATACCGACACTCGAGATTTATCAAACCCCACCGAAGCACTGGATATCGACAATCATTTAGCCCAACACATGATACAACGGCTTGATCAATCTCCGATGCATGCTATACATCATCAGACCGGCGATGAAAGTAATTCGAATTTAGTGCAGCATATTAAGAGTGAGGTGATTGATgcgaaacagcaacaacaagtgcagcaacagcaacatcaccaacagcaacaacatcaattgCATGCTCAACAACTCTCACAAAATCaagcacagcaacagcaacatcaacagcatCAAGTACATCAACAAACAGCACACTCACATACAACACACGTCCAACAGCAAGCACAATCACATCAGGACCTAACCGGAGCAACAGTAATGGAAATCGATCCAAGCCAAATAAAACATGAGCCGGGAATGATCATAACACCGGAAATTGTTAATATGATGACAACTGGACATATGGATATGTACAATTCTGATACAAGTGAGGATTCAATGATGATAGCAAATGGCTCACCAAACGATCAAACTGAGCCACATTACACTAATTTGGACCAACAGCATGTGGATGGTAAAGGTCAGTTTAATGGTCCCAAAACTTGGACTCAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAATATGAGTCTTACAAAAGCATCAGTTACATATGGTATACCATCGACAACTTTATGGCAACGTGCCCATCGTATGGGCATTGAAACGCCAAAGAAGGAGGGTGGTACGAAATCATGGAATGAGGATTCTTTAAATAATGCTTTAGAAGCCCTACGTTCTGGGCAAATATCAGCAAATAAAGCGTCCAAAGCCTTTGGTATACCATCGTCGACTTTGTATAAAATAGCGCGACGTGAAGGTATACGTTTGGCAGCACCATTTAATGCGGCACCCACAACGTGGACACCAGAAGATTTAGAGCGTGCATTGGAAGCAATACGTGCTGGTCATACGTCCGTACAGAAGGCCAGCGCTGAATTTGGCATACCAACGGGCACCTTATACGGCCGTTGCAAGCGTGAAGGTATTGAGTTATCACGTTCGAATCCCACACCATGGTCGGAAGACGCAATGAATGAAGCTCTGAATTCAGTACGAATTGGCCAGATGTCTATTAACCAGGCCGCAATTCATTACAACCTTCCCTACAGCTCTTTGTATGGTCGCTTTAAGCGTGGAAAATATGACGTTACTAATACCAGTAGCACCTCCATTAATAATGCATCAGGAAATACTTCGGGAAGCATCGAAATTATCGAACATAGTCAAGAAAACTCGTTACATATATTTCAGCAACAGTTCCAGTATAGTCCGTCGCCACACCAACAACCTCAGCATGGCGGTCAAACTCAATCACAGACACCTCAACATTTAACCCAGCATGTTGTACACATTCAACAACCACAGACtcatcatcagcagcaacaagtACATgctcaacaacagcaacatatcCAGCAGCAACAAGATGTTGTAACATCCAGCAGCCAGGTGGCACACAGCAGTGCAGGTGCtggtcagcagcagcaacaacaaattcaacaGATCTATCATCATCACAGCACGCCGGAAAGAAGTTGA
Protein Sequence: MHMDGCKGLLRTAEQLKIKGLCETAENTDDLNDSATATITVSENIQQAVVGNIVNATVATGQLSPNIPHQSQQQQQQQITTNTAVLTHNIGNVTTANTQQIGSATANVAGQLVSAGTAVQQQQLGRKSRVRKRSKSPDIQHQVQSTQHPQTILIQNQNQAAIVSLQQTSSGNYIPVSGVQTVSTSGVGQQQTVITGDDSDTDKPSKICKTETASASPTSSVSGVSGTNNAGSVTTVAAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPNTDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHAIHHQTGDESNSNLVQHIKSEVIDAKQQQQVQQQQHHQQQQHQLHAQQLSQNQAQQQQHQQHQVHQQTAHSHTTHVQQQAQSHQDLTGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSEDSMMIANGSPNDQTEPHYTNLDQQHVDGKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVTNTSSTSINNASGNTSGSIEIIEHSQENSLHIFQQQFQYSPSPHQQPQHGGQTQSQTPQHLTQHVVHIQQPQTHHQQQQVHAQQQQHIQQQQDVVTSSSQVAHSSAGAGQQQQQQIQQIYHHHSTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00979276;
90% Identity: iTF_00192007;
80% Identity: -