Ooch015708.2
Basic Information
- Insect
- Ormia ochracea
- Gene Symbol
- -
- Assembly
- GCA_963402855.1
- Location
- OY727109.1:49073740-49088972[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5e-11 7.1e-08 32.1 0.0 1 38 530 568 530 573 0.89 2 4 5.2e-13 7.5e-10 38.4 0.0 2 39 585 622 584 625 0.94 3 4 1e-17 1.5e-14 53.5 0.0 1 45 639 684 639 684 0.98 4 4 5.6e-19 8e-16 57.5 0.0 1 43 691 734 691 736 0.96
Sequence Information
- Coding Sequence
- ATGGAGGCTACGATGGCTGCTGAAGGCTTGGAATTTCTTATTGCTACTCTGGGGCTTTTGCGTACCGCAGAACAGTTGAAAATTAAAGGACTGTGTGAGACAGCAGAAAATGCAGATGATCTGAATGATACGGCGACAGCAACAATAACAGTATCAGAGAATATACAACAAGCTGTTGTTGGTAATATAGTCAATGCCACAGTAGTGCCGGAACAGCAATCTCCTCCTATACCCCACCAGCAACACCAGACGcagcaacaacatcaacacCAGCAACAACAGTTGACAACTACAGCAGTTTTAAGTCCCGGTAGCGCCCAACAGTTAGCTGCTGCCGGTCAGTTGGTCACATCAACACCTGCCAGCACGCCGCAAttgcagcaacagcagcaacaacgaAAATCCAGACTACGTAAACGTTCAAAGTCCCCCGACCTACAgttgcaacagcagcagcaccatcaacagcaacaaaatcaGCAGCACCcacaaacaatattaatacaaaatcaaaatcaagcCGCTATTGTCAGTCTACAGCAGACATCGGCTGGTAATTATATACCCGTGTCAGGTGTACAGACGGTAACCACCAGTGTAGCAGGTGGCCATCAGCAACAGCAGACCACCATTGTAACAGCGGACGATTCGGATTCGGATAAACCCTCCctggaaaaaatttgcaaaactgAAGCGTCTTCTGCTTCCCCGGCATCGTCTTCCTCGGTATCAGCATCAAATAATGCTGGTGGCGTAACTGCGGTCACAGCATCGGGAACAGCGATCGTAACACAAATTGTAGTAGCAAGAGAcggaaaagataaaaatatgacTAGTTTAGGCATGGGAGTGAATGGTGCCCTTCTAGGAGTCCCTATGGGCTTTTTAGATTTTGCCCCCGAACCACCGGCACCCTCAGCAACACCAGTCACAGTTACAGAACATGTAGATTTATCCTGTCACCCCAGCACGGATACCCGAGATTTATCAAATCCCTCAGAACCGCTCGATATCGACAATCATTTGGCTCAGCACATGATACAACGGCTCGATCAATCTCCCATGCATACCATGCACCATCACACTGGCGACGAATCAAATTCGAACCTTGTCCAACATATAAAGAGTGAAGTTCTTGATGTCAAACAGCAACAGGTCCAACAGCACCAACAGGCTGCTGTAGTTGCTCATCATCAAGCTCAACAGCAACAGTTGCATGTACAACAGTTAGCCGCGCAGGGACAAACAcaccagcagcaacagcaggcAGCTcatcagcagcaacagcagacGCATCAACATCATCAGCAACAGGCTCACCAGCAACATCACCAAGAGATTACTGGCGCCACCGTAATGGAGATTGATCCGAGCCAAATAAAACATGAACCCGGCATGATAATAACACCggaaattgtaaatatgaTGACGACAGGAGGGCATATGGACATGTACAATTCCGATACGAGCGATGATTCAATGATGATTGCCAACGGTTCACCACATGATCAAAATGAACCTcattatacaaatttagatCAACAGCATGGCGATATGAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAGAACATGAGCCTGACGAAAGCATCCGTTACCTATGGCATCCCCTCTACTACACTCTGGCAAAGGGCTCATCGTATGGGCATCGAAACACCGAAGAAGGAAGGAGGTACGAAATCATGGAATGAAGACTCGCTGAACAGTGCACTGGACGCTTTGCGATCAGGACAAATATCGGCCAACAAGGCATCGAAGGCCTTTGGTATACCTTCGTCGACGTTGTATAAAATAGCTCGACGTGAAGGTATACGATTGGCAGCCCCATTTAATGCCGCTCCTACCACATGGACACCAGAGGATTTGGAAAGGGCTTTAGAAGCAATACGTGCAGGTCATACGTCCGTACAGAAGGCAAGTGGAGAATTTGGTATTCCCACAGGCACATTGTACGGCCGTTGCAAACGTGAAGGCATTGAGTTATCCCGCTCGAATCCAACACCCTGGTCTGAAGATGCTATGAATGAAGCTTTAAATTCTGTGCGCATCGGGCAAATGTCTATCAATCAAGCTGCTATCCATTATAATCTACCATATAGTTCTTTATATGGTCGCTTTAAACGTGGCAAATATGATGTGGCCAATACAAGTGGTACTTCCATAAACAATACATCGGGCAACACCTCCGGCAgtattgaaattattgaacATAGTCAAGAGAATTCGttGCCTATGTTTCAGCAACAATTCCAATATAGTCCATCGCCGCATCAGCAACAACATGGCGGCAGTAGTACACCGCAACAAAGTCAAACGCCACAGCATCTACAGCAACATGTCGTGCATATACAGCAACATCATCAGCAGCAGACACAGCATGCGCAACATATCCAACAGCAAGACGTTGTAACATCGTCAAGTCAACAGCAAGTCCAGCAGCAACATGCTAACAATGCGGCAGCCTCCCAACAACAGCAAATTCAGCAAATATATCATCACCACAGTACACCCGAAAGAAGTTGA
- Protein Sequence
- MEATMAAEGLEFLIATLGLLRTAEQLKIKGLCETAENADDLNDTATATITVSENIQQAVVGNIVNATVVPEQQSPPIPHQQHQTQQQHQHQQQQLTTTAVLSPGSAQQLAAAGQLVTSTPASTPQLQQQQQQRKSRLRKRSKSPDLQLQQQQHHQQQQNQQHPQTILIQNQNQAAIVSLQQTSAGNYIPVSGVQTVTTSVAGGHQQQQTTIVTADDSDSDKPSLEKICKTEASSASPASSSSVSASNNAGGVTAVTASGTAIVTQIVVARDGKDKNMTSLGMGVNGALLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCHPSTDTRDLSNPSEPLDIDNHLAQHMIQRLDQSPMHTMHHHTGDESNSNLVQHIKSEVLDVKQQQVQQHQQAAVVAHHQAQQQQLHVQQLAAQGQTHQQQQQAAHQQQQQTHQHHQQQAHQQHHQEITGATVMEIDPSQIKHEPGMIITPEIVNMMTTGGHMDMYNSDTSDDSMMIANGSPHDQNEPHYTNLDQQHGDMKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALDALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASGEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSGTSINNTSGNTSGSIEIIEHSQENSLPMFQQQFQYSPSPHQQQHGGSSTPQQSQTPQHLQQHVVHIQQHHQQQTQHAQHIQQQDVVTSSSQQQVQQQHANNAAASQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00258784;
- 80% Identity
- -