Basic Information

Insect: Bactrocera correcta
Gene Symbol: -
Assembly: GCA_027475135.1
Location: CM050325.1:72119532-72126499[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 4.8 5.6e+03 -2.1 0.5 16 24 388 396 387 397 0.86

2 5 9.7e-11 1.1e-07 32.1 0.0 1 38 509 547 509 552 0.89

3 5 3e-13 3.5e-10 40.2 0.0 2 39 564 601 563 604 0.94

4 5 3.6e-17 4.1e-14 52.7 0.0 1 45 618 663 618 663 0.98

5 5 1e-18 1.2e-15 57.7 0.0 1 43 670 713 670 715 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	4.8	5.6e+03	-2.1	0.5	16	24	388	396	387	397	0.86
2	5	9.7e-11	1.1e-07	32.1	0.0	1	38	509	547	509	552	0.89
3	5	3e-13	3.5e-10	40.2	0.0	2	39	564	601	563	604	0.94
4	5	3.6e-17	4.1e-14	52.7	0.0	1	45	618	663	618	663	0.98
5	5	1e-18	1.2e-15	57.7	0.0	1	43	670	713	670	715	0.96

Sequence Information

Coding Sequence: ATGTCAGTTTCGGCTATGTCTCCTGGTTCGCCGAAGGGTTTATTACGTACAGCCGAACAGCTGAAAATTAAAGGACTTTGTGAGACGGCCGAAAACACAGACGATTTGAACGACTCGGCTACAGCCACAATTACAGTATCGGAGAATATACAGCAAGCCGTCGTTGGAAATATCGTTAATGCCACAGTAGCAACGGGTCAACTCTCACCCAATATACCACATCAATCGCAACAGCAGCAACAACAGATCGCTACTAATACAGCGGTGCTCACGCATAATATTGGCAACGTGACCACTGCAAATACACAACAAATTGGTTCAGCCACTACGAATGTCACCGGACAGTTAGTTAGTGCAGGCACATCGGTACAACATCAACAGATTGGACGTAAATCTCGTGTACGTAAGCGTTCAAAATCTCCAGATATACAACAACAAGTACAGAGTACACAACAACCACAAACAATTTTAATACAAAATCAAAATCAAGCCGCTATTGTTAGTTTACAACAGACGTCGTCTGGTAATTATATACCGGTATCCGGTGTACAAACGGTTAGCACTAGCGGTGGTGGGCAACAGCAGACGGTAATCACCGGTGACGATTCGGATACGGATAGGCCGGGGAAGATCTGTAAGACAGAAACAGCGTCAGCTTCACCTGCGTCCAGCGCATCTGGTGTATCGGGAACGAATAATGCTGGCAGCGTAACGACCGTTGCAGCACCAGGCACAGCGATTGTAACGCAGATTGTAGTACGAGACGGCAAAGATAAAAATATGACTAGTTTAGGAATGGGAATGAATGGCGGAATTCTTGGAGTGCCAATGGGCTTTTTAGATTTTGCACCAGAACCTCCAGCACCCTCAGCCACCCCGGTAACAGTAACGGAGCATGTCGATTTATCATGCAATCCAAATACCGACACTCGAGATTTATCAAACCCCACCGAAGCACTGGACATCGACAATCATTTAGCCCAACACATGATTCAACGGCTTGATCAATCTCCGATGCATGCTATTCATCATCAGACTGGTGATGAAAGCAATTCGAATTTAGTACAGCATATTAAGAGTGAGGTGATTGATGCGAAACAACAACAACAAGTACAGCAACAGCAACATCATCAACAGCAACAACATCAATTACATGCTCAACAACTCTCACAAAATCAAGCACAGCAACAGCAACACCAACAGCATCAAGTACATCAACAACAAACAGCACACTCACATTCAACACACGTCCAACAACAAGCACAATCACATCAGGACCTAAGCGGAGCAACAGTAATGGAAATCGATCCAAGCCAAATAAAACATGAACCCGGAATGATCATAACACCGGAAATTGTTAATATGATGACCACTGGACATATGGATATGTATAATTCTGATACAAGTGAGGATTCAATGATGATAGCAAATGGCTCACCAAACGATCAAACTGAGCCACATTATACTAACTTGGACCAACAGCACGTGGATGGTAAAGGTCAGTTTAATGGTCCGAAAACTTGGACCCAAGATGACATGAATTCAGCTTTAGATGCATTGAAGAATCAAAATATGAGTCTTACAAAAGCATCAGTTACATATGGCATACCATCGACCACTTTATGGCAACGTGCCCATCGTATGGGCATCGAAACGCCAAAGAAGGAGGGTGGTACGAAATCATGGAATGAAGATTCTTTGAATAATGCTTTAGAAGCCCTACGTTCTGGGCAAATATCAGCAAATAAAGCGTCCAAAGCCTTTGGTATACCATCCTCGACATTATATAAAATTGCGCGACGCGAAGGCATACGCTTGGCGGCACCCTTTAATGCGGCACCCACAACGTGGACACCGGAAGATTTAGAGCGTGCATTAGAAGCAATACGCGCTGGCCATACGTCCGTACAAAAGGCCAGCGCTGAATTTGGCATACCAACGGGCACCCTATACGGTCGTTGCAAGCGCGAAGGCATTGAGTTATCACGTTCGAATCCAACACCATGGTCGGAAGACGCAATGAATGAAGCTTTGAATTCAGTTCGCATTGGTCAGATGTCTATTAATCAGGCCGCAATTCACTATAACCTTCCCTACAGTTCTTTGTATGGTCGCTTTAAGCGTGGAAAGTATGACGTTACTAATACCAGTAGCACCTCCATTAATAATGCATCAGGAAATACTTCGGGAAGCATCGAAATTATCGAACATAGTCAAGAAAACTCGTTACATATGTTTCAGCAACAGTTCCAGTATAGTCCGTCGCCACATCAACAACCTCAGCATGGCGGTCAAACTCAATCGCAGACACCTCAACATATAACCCAACATGTTGTACACATTCAGCAACCACAGACTCATCATCAGCAGCAACAAGTACATGCTCAACAACAGCAACATATCCAGCAGCAACAAGATGTTGTAACATCCAGCAGCCAGGTGGCACATAGCAGTGCAGCTGTTGGGCAGCAGCAACAACAACAAATTCAACAGATCTATCATCATCACAGCACGCCGGAAAGAAGTTGA
Protein Sequence: MSVSAMSPGSPKGLLRTAEQLKIKGLCETAENTDDLNDSATATITVSENIQQAVVGNIVNATVATGQLSPNIPHQSQQQQQQIATNTAVLTHNIGNVTTANTQQIGSATTNVTGQLVSAGTSVQHQQIGRKSRVRKRSKSPDIQQQVQSTQQPQTILIQNQNQAAIVSLQQTSSGNYIPVSGVQTVSTSGGGQQQTVITGDDSDTDRPGKICKTETASASPASSASGVSGTNNAGSVTTVAAPGTAIVTQIVVRDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPNTDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHAIHHQTGDESNSNLVQHIKSEVIDAKQQQQVQQQQHHQQQQHQLHAQQLSQNQAQQQQHQQHQVHQQQTAHSHSTHVQQQAQSHQDLSGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSEDSMMIANGSPNDQTEPHYTNLDQQHVDGKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVTNTSSTSINNASGNTSGSIEIIEHSQENSLHMFQQQFQYSPSPHQQPQHGGQTQSQTPQHITQHVVHIQQPQTHHQQQQVHAQQQQHIQQQQDVVTSSSQVAHSSAAVGQQQQQQIQQIYHHHSTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00979276;
90% Identity: iTF_00192007;
80% Identity: -