Dcan021167.1
Basic Information
- Insect
- Dexiosoma caninum
- Gene Symbol
- -
- Assembly
- GCA_963924685.1
- Location
- OZ004728.1:86145333-86174944[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7e-11 1.2e-07 32.1 0.0 1 38 540 578 540 583 0.89 2 4 2.2e-13 3.6e-10 40.1 0.0 2 39 595 632 594 635 0.94 3 4 2.6e-17 4.3e-14 52.7 0.0 1 45 649 694 649 694 0.98 4 4 7.8e-19 1.3e-15 57.5 0.0 1 43 701 744 701 746 0.96
Sequence Information
- Coding Sequence
- ATGAAGACTTGGTCCGCTAAGCTCAAGCGAGCTGCCAAATATTGCCAAGTATTGCTTTCCATTGGTCTTTTGCGCACCGCCGAACAGCTAAAAATCAAAGGTCTATGCGAGACAGCAGAAAATGCCGATGATCTGAACGATACGGCCACAGCAACAATAACCGTATCAGAGAATATACAACAAGCTGTCGTTGGCAATATTGTCAATGCTACAGTAGTGCCGGGGCCGCAGTCTCCTCATATACCCCACCAACAACATCAgacacaacaacagcagcagcaacagcatcaACACCAGCACCAGCAACAGCAATTGACCACTACCGCCGTCTTAAGTCCCGGAAGTGCTCAACAGTTGGCAGTTGCCGGACAATTGGTGACAACAGCGCCTGCCACAACgagccaacaacaacagcagctgcAACAACGAAAATCCAGAGTACGTAAACGTTCAAAATCCCCCGATCTACAGTTGCAACAGCAGCATCACCAGCACCATCAGCAGCAACAAAATCAACAGCACCCACAGgcaatattaatacaaaatcaaaatcaaGCTGCTATTGTCAGTCTACAACAGACATCGGCTGGGAACTATATACCCGTTTCAGGTGTACAAACGGTAACCACCAGTGTAGCCGGTGGACAACAGCAACAGACCACCATTGTAACGGCGGACGATTCGGATTCGGATAAGCCATCGCTGCAAAAGATTTGCAAAACTGAAGCGTCTTCAGCTTCACCAGCGTCCACTTCTTCGGTACCAGCAACAAATAATGCTGGTGGCGTAACTGCGGTCACAGCATCGGGAACAGCGATCGTAACACAAATTGTAGTAGCAAGAGAcggaaaagataaaaatatgaCTAGTTTAGGCATGGGCATGaatgGTGGCATTCTAGGAGTCCCTATGGGCTTTTTAGATTTTGCCCCTGAACCACCGGCACCCTCAGCAACACCTGTCACGGTTACAGAACATGTAGATTTATCCTGTAACCCCAGCACGGACACCCGAGATCTATCAAATCCGTCGGAACCGCTCGATATCGATAATCATTTGGCTCAGCACATGATACAACGGCTCGATCAATCTCCCATGCATACCATACATCATCAGACTGGCGACGAATCAAATTCAAATCTGATTCAGCATATAAAAAGCGAAGTTATTGATGTCAAGCAACAGCAACAGGtccaacagcaacagcaagcTGCTGCAGTCGCTCACCATCAGGCTCAACAACAGCAGTTGCATGCACAACAATTAGCAGCAGCGCAAGGTCAAACAcatcagcagcaacagcaggCAGCCCATCAGCAGCAGCAGGCACATCAACATCACCAGCAACAGGCCCACcaacatcatcaagagattacCGGAGCCACCGTAATGGAGATTGATCCGAGCCAAATAAAACATGAACCGGGCATGATAATAACACCGGAAATTGTAAATATGATGACAACAGGGCATATGGACATGTACAATTCCGATACGAGCGATGATTCAATGATGATTGCCAACGGTTCACCACATGATCAAAATGAACCCCATTACACAAATTTAGATCAACAGCATGGCGATATGAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCACTGAAGAATCAAAACATGAGCCTGACGAAAGCATCCGTTACCTATGGCATCCCCTCAACTACACTATGGCAAAGGGCCCACCGCATGGGCATCGAAACACCGAAGAAGGAAGGAGGCACGAAATCCTGGAATGAAGACTCTCTAAATAACGCACTGGAGGCCTTGCGTTCAGGACAAATATCGGCCAACAAGGCATCAAAAGCCTTTGGTATACCTTCGTCAACGTTGTATAAAATAGCACGGCGTGAAGGTATACGATTGGCAGCGCCGTTCAATGCCGCCCCCACCACTTGGACGCCAGAAGATTTGGAAAGAGCTTTGGAGGCAATACGTGCGGGTCATACATCGGTACAGAAGGCAAGTGCAGAATTTGGTATTCCCACAGGCACATTATACGGCCGCTGTAAACGTGAGGGCATCGAATTATCCCGATCCAATCCAACTCCCTGGTCTGAAGATGCTATGAATGAAGCTTTAAATTCTGTGCGCATTGGCCAAATGTCTATAAACCAAGCTGCTATCCATTACAATCTCCCATATAGTTCCCTATATGGTCGCTTTAAACGCGGTAAATATGATGTGGCCAATACAAGCGGTACTTCCATAAATAATACATCGGGCAATACTTCCGGTAGTATTGAAATTATTGAACATAGTCAAGAGAATTCGCAACAATTCCAATATAGTCCATCGCCGCATCAGCAACAGCATGGCGGCAGTAGTACACCACAGCAAAGTCAAACGCCACAGCATCTACAGCAACACGTTGTACATATAcagcaacatcatcagcaacagACACAACATGCGCAACATATCCAACAGCAGGATGTTGTAACATCGTCAAGTCAACAGCAagtccaacagcaacaacatgcCACTAATGCGGCAGCCTcccaacagcaacaaattcagCAAATCTATCATCATCACAGTACACCCGAAAGAAGTTGA
- Protein Sequence
- MKTWSAKLKRAAKYCQVLLSIGLLRTAEQLKIKGLCETAENADDLNDTATATITVSENIQQAVVGNIVNATVVPGPQSPHIPHQQHQTQQQQQQQHQHQHQQQQLTTTAVLSPGSAQQLAVAGQLVTTAPATTSQQQQQLQQRKSRVRKRSKSPDLQLQQQHHQHHQQQQNQQHPQAILIQNQNQAAIVSLQQTSAGNYIPVSGVQTVTTSVAGGQQQQTTIVTADDSDSDKPSLQKICKTEASSASPASTSSVPATNNAGGVTAVTASGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPSEPLDIDNHLAQHMIQRLDQSPMHTIHHQTGDESNSNLIQHIKSEVIDVKQQQQVQQQQQAAAVAHHQAQQQQLHAQQLAAAQGQTHQQQQQAAHQQQQAHQHHQQQAHQHHQEITGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSDDSMMIANGSPHDQNEPHYTNLDQQHGDMKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSGTSINNTSGNTSGSIEIIEHSQENSQQFQYSPSPHQQQHGGSSTPQQSQTPQHLQQHVVHIQQHHQQQTQHAQHIQQQDVVTSSSQQQVQQQQHATNAAASQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00258784;
- 80% Identity
- -