Ehis040874.1
Basic Information
- Insect
- Eustalomyia histrio
- Gene Symbol
- -
- Assembly
- GCA_949748255.1
- Location
- OX456527.1:40914723-40938164[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.2e-11 2.1e-07 31.9 0.0 1 38 597 635 597 640 0.89 2 4 2.2e-13 6.7e-10 40.0 0.0 2 39 652 689 651 692 0.94 3 4 2.7e-17 7.9e-14 52.5 0.0 1 45 706 751 706 751 0.98 4 4 2.6e-19 7.9e-16 58.9 0.0 1 45 758 803 758 803 0.97
Sequence Information
- Coding Sequence
- ATGTATCGTGACATTTTGAAAGAAGTTATGTTGCCATATGCTGACGATGAAATGCCACTTCAATGGAGGTTCCAACAGGATAACGATCCTAAACACACCTCCAAAggTCTTTTACGTACTGCTGAGCAGTTAAAAATCAAAGGTTTGTGTGAAACAGCCGAAAATGCTGATGATTTAAATGATGCTGCCACAGCAACAATAACAGTATCAGAAAATATACAACAAGCTGTCGTTGGTAATATTGTCAATGCTACCGTAGTACCAGGACAACAATCGCCACCAATACCCCACCAATCACAtcaacagcaacagcagcatcaacaacaacagcagcaacaacaacaacagcagcagcaacaacagcaacagcaattGGCAAATACGGCTGTCTTAGCACATGCTGTTAGTCCGGGTCCAGTGCAACAAATAGTCACAGCAGGACAATTGGTAACATCAACACCTATCAGTACTCCACaacaaacacaacaacaacaacaaattggaCGAAAATCAAGAGTACGTAAACGTTCTAAATCACCGGACTTGCAATTACAACAGCATCAGCAGCAACagaatcaacaacaacaacaacatccccaggcaattttaatacaaaatcaaaatcaGGCTGCTATTGTAAGTCTACAACAAACATCAGACGGCAATTATATACCCGTATCGGGAGTACAAACAGTTACCACAAGTGTATCTAGCAATCAACATCagcatcagcaacaacaacaacagcatacCACAATTGTAACAGCTGACGATTCAGACTCGGAAAATAAACCcacattacaaaaaatttgtaaaactgaAACATCATCAGCTTCACCGGCGTCCACATCTTCGGCATCAGCGTCAAATAATGCTGCAGGTGTAACTGCTGTAACAGCACCGGGAACAGCCATCGTAACACAAATTGTAGTAGCAAGAGAcggaaaagataaaaatatgacTAGTTTAGGCATGGGAATGaatggtGGCATTCTAGGAGTCCCTATGGGCTTTTTAGATTTTGCCCCTGAACCACCGGCACCATCAGCAACACCTGTCACCGTTACAGAACATGTAGATTTATCATGTAACCCCAGTACGGATACCAGAGATTTATcaaATCCCTCAGAACCGCTCGATATCGATAATCATTTGGCCCAACACATGATACAACGGCTTGATCAATCTCCCATGCACTCCATACATCATCAGACGGGTGACGAATCAAATTCGAATCTGGTCCAGCATATAAAAAGTGAAGTTATCGAtgccaaacaacaacaacaacaacaccagcaacagcagcaacaacaggcccaacagcaacaacagcagcagcagcaacaacaagcAGCCGCCCACCATCAAGCTCAACAACAACAGTTGCATGCCCAACAATTAGCAGCGCAGCAGGGGCAATCacatcaacagcagcaacaacagcagcagcaagcagcccatcagcaacaacaacagcaggcacatcagcagcaacaacaacagcaacaccaCCAACAGTCCCACCAACAACATCACCAGGAGATATCCGGAGCCACCGTTATGGAGATTGATCCAAGCCAAATAAAACATGAGCCGGGAATGATAATAACACCGGAAATTGTTAATATGATGACAACAGGGCATATGGACATGTACAATTCCGATACGAGCGATGATTCAATGATGATTGCCAATGGTTCACCACACGATCAAAATGAACCCCACTACACCAATTTAGATCAACAACATGGCGATATGAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAACATGAGCCTGACGAAAGCATCCGTTACCTATGGCATCCCCTCAACCACACTTTGGCAAAGGGCCCACCGCATGGGCATCGAAACACCGAAGAAGGAAGGAGGTACCAAATCGTGGAATGAAGACTCCCTCAACAATGCTTTGGAAGCCTTGCGGTCTGGACAGATATCGGCGAATAAAGCCTCGAAAGCCTTTGGTATACCTTCGTCGACGTTGTACAAAATAGCACGACGTGAAGGTATACGACTGGCAGCACCGTTTAATGCCGCCCCCACCACCTGGACACCGGAGGATTTGGAAAGGGCCTTGGAGGCAATACGTGCGGGTCATACATCGGTGCAGAAGGCAAGCGCAGAATTTGGAATACCCACAGgaacttTATATGGACGTTGCAAACGTGAAGGTATTGAATTGTCCCGATCAAATCCTACACCTTGGTCGGAAGATGCTATGAATGAAGCATTAAATTCAGTGCGCATTGGCCAAATGTCTATCAATCAAGCTGCTATACATTACAATTTACCATACAGTTCATTATATGGACGTTTCAAACGTGGCAAATATGATGTGTCCAATATAAGTGGTGTTACATCCATTAATAACACATCGGGCAATACCTCCGGTAGCATTGAAATTATTGAGCATAGTCAAGAGAATTCGttGCCTATGTTTCAGCAACAATTCCAATATAGTCCATCACCGCATCAACAACATGGCGGTGGTAATACAACACCGCAACAAAGCCAAACACCACAACATTTACAACAACATGTGGTGcatatacaacaacaacagcagcagcatcatCAACAGCCACAACATGCGCAACATCTACAACAGCAGCAAGATGTTGTAACCTCATCAAGTCAGCAACAACAagtccaacaacaacaacaacagcagcaacaacatgcCAGTAATACACAAGCCTCACAGCAACAACAACTTCAACAGATTTATCATCATCACAGTACACCCGAGAGAAGTTGA
- Protein Sequence
- MYRDILKEVMLPYADDEMPLQWRFQQDNDPKHTSKGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATVVPGQQSPPIPHQSHQQQQQHQQQQQQQQQQQQQQQQQQLANTAVLAHAVSPGPVQQIVTAGQLVTSTPISTPQQTQQQQQIGRKSRVRKRSKSPDLQLQQHQQQQNQQQQQHPQAILIQNQNQAAIVSLQQTSDGNYIPVSGVQTVTTSVSSNQHQHQQQQQQHTTIVTADDSDSENKPTLQKICKTETSSASPASTSSASASNNAAGVTAVTAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPSEPLDIDNHLAQHMIQRLDQSPMHSIHHQTGDESNSNLVQHIKSEVIDAKQQQQQHQQQQQQQAQQQQQQQQQQQAAAHHQAQQQQLHAQQLAAQQGQSHQQQQQQQQQAAHQQQQQQAHQQQQQQQHHQQSHQQHHQEISGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSDDSMMIANGSPHDQNEPHYTNLDQQHGDMKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVSNISGVTSINNTSGNTSGSIEIIEHSQENSLPMFQQQFQYSPSPHQQHGGGNTTPQQSQTPQHLQQHVVHIQQQQQQHHQQPQHAQHLQQQQDVVTSSSQQQQVQQQQQQQQQHASNTQASQQQQLQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_01165452;
- 80% Identity
- -