Basic Information

Insect: Bactrocera latifrons
Gene Symbol: lolal
Assembly: GCA_001853355.1
Location: NW:1535129-1586992[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1.5 2.6e+03 -2.3 0.5 16 24 481 489 480 490 0.86

2 5 3e-11 5.3e-08 32.0 0.0 1 38 602 640 602 645 0.89

3 5 9.2e-14 1.6e-10 40.0 0.0 2 39 657 694 656 697 0.94

4 5 1.1e-17 1.9e-14 52.5 0.0 1 45 711 756 711 756 0.98

5 5 3.1e-19 5.5e-16 57.5 0.0 1 43 763 806 763 808 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1.5	2.6e+03	-2.3	0.5	16	24	481	489	480	490	0.86
2	5	3e-11	5.3e-08	32.0	0.0	1	38	602	640	602	645	0.89
3	5	9.2e-14	1.6e-10	40.0	0.0	2	39	657	694	656	697	0.94
4	5	1.1e-17	1.9e-14	52.5	0.0	1	45	711	756	711	756	0.98
5	5	3.1e-19	5.5e-16	57.5	0.0	1	43	763	806	763	808	0.96

Sequence Information

Coding Sequence: ATGGCATCGAGAAGTCACCAGTATTTTAGTTTGCGTTGGAACAATTACCAAAACACCATGACTTCGGTGTTCCAGCAATTGCGAGAAGACTTATCTTTCGTGGATGTGACCCTTTCATGTGAGCATGGTTCGCTAAAAGCACACAagGTTGTTCTATCCGCCTGCTcatcatattttcaaaaactgctTTTGGAAAATCCCTGCAAACATCCCACCATCATACTTCCCGGCGATATTATATTTACGGATTTGAAGACCattattgattttgtttatcGCGGCGAAATTGATGTCACCGAATCTGAATTGCAGGGTTTATTACGTACAGCCGAACAGCTGAAAATTAAAGGACTTTGTGAGACGGCCGAAAACACAGACGATTTGAACGACTCGGCTACAGCTACAATTACAGTATCGGAGAATATACAGCAAGCCGTTGTTGGAAATATCGTTAATGCCACAGTAGCAACGGGTCAACTCTCACCCAATATACCACATCAAtcgcaacagcagcaacaacagatTGCTACTAATACAGCGGTGCTCACGCATAATATTGGCAACGTGACCACTGCAAATACACAACAAATTGGTTCAGCCACTACGAATATCGCCGGACAGTTAGTTAGTGCAGGCACATCGGTACAACATCAACAGATTGGACGTAAATCTCGTGTACGTAAGCGTTCAAAATCTCCAGatatacaacaacaagtacagagtacacaacaaccacaaacaattttaatacaaaatcaaaatcaagccgCTATTGTTAGTTTACAACAGACGTCGTCTGGTAATTATATACCGGTATCCGGTGTACAAACGGTTAGCACTAGCGGTGGTGGACAACAGCAGACGGTAATCACCGGCGACGACTCGGATACGGATAGACCGGGGAAGATCTGTAAGACAGAAACAGCGTCAGCGTCACCTGCGTCCAGCGCATCTGGTGTATCGGGAACGAATAATGCTGGCAGCGTAACGACTGTTGCAGCACCAGGCACAGCGATTGTAACGCAGATTGTAGTAGCACGAGAcggaaaagataaaaatatgaCTAGTTTAGGAATGGGAATGaatggCGGAATTCTTGGAGTGCCAATGGGCTTTTTAGATTTTGCACCAGAACCTCCAGCACCCTCAGCCACACCGGTAACAGTAACGGAGCATGTCGATTTATCATGCAATCCAAATACCGACACTCGAGATTTATCAAACCCCACCGAAGCACTGGACATCGACAATCATTTAGCCCAACACATGATTCAACGGCTTGATCAATCTCCGATGCATGCTATTCACCATCAGACTGGTGATGAAAGCAATTCGAATTTAGTACAGCATATTAAGAGTGAGGTGATTGatgcgaaacaacaacaacaagtacagcaacagcaacatcatcaacagcaacaacatcaattgCATGCTCAACAACTCTCACAAAATCAagcacagcaacagcaacaccaacagcatcaagtacatcaacaacaaacagcacaCTCACATTCAACACACGtccaacaacaagcacaatCACATCAGGACCTAAGCGGAGCAACAGTAATGGAAATCGATCCAAGCCAAATAAAACATGAACCCGGAATGATCATAACACCGGAAATTGTTAATATGATGACCACTGGACATATGGATATGTACAATTCTGATACAAGTGAGGATTCAATGATGATAGCAAATGGCTCACCAAACGATCAAACTGAGCCACATTATACTAATTTGGACCAACAGCACGTGGATGGTAAAGGCCAGTTTAATGGTCCGAAAACTTGGACTCAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAATATGAGTCTAACAAAAGCATCAGTTACATATGGTATACCATCAACCACTTTATGGCAACGTGCCCATCGTATGGGCATCGAAACGCCAAAGAAGGAGGGGGGTACGAAATCATGGAATGAAGATTCATTGAATAATGCTTTAGAAGCCCTACGTTCTGGGCAAATATCAGCAAATAAAGCGTCCAAAGCCTTTGGTATACCATCCTCGacattatataaaattgctcgACGTGAAGGCATACGCTTGGCGGCACCCTTTAATGCGGCACCCACAACGTGGACACCGGAAGATTTAGAGCGTGCATTAGAAGCAATACGCGCTGGTCATACGTCCGTACAAAAGGCCAGCGCCGAATTTGGCATACCTACGGGCACCCTATACGGTCGTTGTAAGCGCGAAGGCATTGAGTTATCACGCTCGAATCCAACACCATGGTCGGAAGACGCAATGAATGAAGCTTTGAATTCAGTTCGCATTGGTCAGATGTCTATTAATCAGGCCGCAATTCACTATAACCTTCCCTACAGCTCTTTGTATGGTCGCTTTAAGCGTGGAAAGTATGACGTTACTAATACAAGTAGCACCTCCATTAATAATGCATCAGGAAACACTTCGGGAAGCATCGAAATTATCGAACATAGTCAAGAAAACTCGTTACATATGTTTCAGCAACAGTTCCAGTATAGTCCGTCGCCACATCAACAACCTCAGCATGGCGGTCAAACTCAATCACAGACACCTCAACATATAACCCAACATGTTGTACACATTCAGCAACCACAGACtcatcatcagcagcaacaagtaCATgctcaacaacagcaacatatcCAGCAGCAGCAAGATGTTGTAACATCCAGCAGCCAGGTGGCACATAGCAGTGCAGGTGttgcacagcagcaacaacaacaaattcaacagATCTATCATCATCACAGCACGCCGGAAAGAAGTTGA
Protein Sequence: MASRSHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSSYFQKLLLENPCKHPTIILPGDIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENTDDLNDSATATITVSENIQQAVVGNIVNATVATGQLSPNIPHQSQQQQQQIATNTAVLTHNIGNVTTANTQQIGSATTNIAGQLVSAGTSVQHQQIGRKSRVRKRSKSPDIQQQVQSTQQPQTILIQNQNQAAIVSLQQTSSGNYIPVSGVQTVSTSGGGQQQTVITGDDSDTDRPGKICKTETASASPASSASGVSGTNNAGSVTTVAAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPNTDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHAIHHQTGDESNSNLVQHIKSEVIDAKQQQQVQQQQHHQQQQHQLHAQQLSQNQAQQQQHQQHQVHQQQTAHSHSTHVQQQAQSHQDLSGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSEDSMMIANGSPNDQTEPHYTNLDQQHVDGKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVTNTSSTSINNASGNTSGSIEIIEHSQENSLHMFQQQFQYSPSPHQQPQHGGQTQSQTPQHITQHVVHIQQPQTHHQQQQVHAQQQQHIQQQQDVVTSSSQVAHSSAGVAQQQQQQIQQIYHHHSTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00979276;
90% Identity: iTF_00192007;
80% Identity: iTF_00191455;