Mror030420.1
Basic Information
- Insect
- Melanophora roralis
- Gene Symbol
- -
- Assembly
- GCA_963583895.1
- Location
- OY757191.1:76644719-76661361[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-10 1.4e-07 32.1 0.0 1 38 513 551 513 556 0.89 2 4 3.2e-13 4.3e-10 40.1 0.0 2 39 568 605 567 608 0.94 3 4 3.8e-17 5.1e-14 52.7 0.0 1 45 622 667 622 667 0.98 4 4 1.2e-18 1.6e-15 57.6 0.0 1 43 674 717 674 719 0.96
Sequence Information
- Coding Sequence
- ATGGTTACCTATAATCAAAGAGATTTTACTGTAGTACCGGGCggtCTTTTACGCACCGCTGAACAGTTAAAAATTAAGGGTCTTTGTGAGACAGCAGAAAACGCTGACGATCTAAATGATACGGCCACAGCAACAATAACAGTATCCGAGAATATACAGCAGGCAGTCGTTGGTAATATTGTCAATGCTACGGTAGTGCCGGGTCAGCAATCTCCTCCAATACCCCACCAGCAACATCAGCAATTAACCACAACCGCCGTCTTAAGTCCCGGAAGTGCACAACAGTTAGCAGCTGCCGGACAATTGATCACATCAACACCTGCCACAACACCGCAACAGcatcagcagcagcagcagcagcaacaacaaagaaaatccAGAGTACGAAAACGTTCAAAATCGCCCGATTTACAGTTGCAGCAACAAAATCAACAGCAGGCATtattaatacaaaatcaaaattcaatTGTTAGTCTACAACAGACATCGGCTGGCAACTATATACCCGTATCGGGAGTACAAACAGTAACTACCAGCGCTGCCATTGGCCAACatcatcagcaacaacaacacacCACCACAATTGTAACGGCAGACGATTCGGACTCGGATAAACCGACATTGCAAAAGATTTGCAAAACTGAAGCATCCTCAGCTTCACCGGCGTCCACATCATCAGCATCGGCATCAAATAATGCTGGTGGCTTAACTTCAGTTACAGCATCAGGCACAGCGATCGTAACACAAATTGTAGTAGCAAGAGAcggaaaagataaaaatatgacTAGTTTAGGCATGGGAATGaATGGTGGCATTCTAGGAGTCCCTATGGGCTTTTTAGATTTTGCCCCTGAACCACCGGCACCATCAGCAACACCTGTTACGGTTACAGAACACGTAGATTTGTCATGTAACCCCAGCACGGATACCAGAGATTTATCaaATCCCTCAGAACCGCTCGATATCGATAATCATTTGGCTCAGCACATGATACAACGGCTCGATCAATCTCCCATGCATACCATACACCATCAAACCGGTGACGAATCAAATTCGAATCTGGTGCATATAAAAAGTGAAGTAATCGATGTGAAACAGCAACAGGCCCAACAGCAAGCCGCTGTAGCTGCCCATCATCAAGCTCAACAGCAACAGTTACATGCCCAACAGTTAGCTGCAGCCCAAGGACAAACacatcaacagcaacaacagcaattaGCCCATCAGCAGCAACATCAGGCACATCAACAACACCACCAGCAACACGCCCACCAACAACATCATCAGGAAATAACCGGAGCCACCGTCATGGAGATTGATCCGAGCCAAATTAAACATGAGCCGGGCATGATAATAACACCGGAAATTGTAAATATGATGACGACAGGGCATATGGacATGTACAATTCCGATACGAGCGATGATTCAATGATGATTGCCAACGGTTCACCACATGATCAAAATGAACCACATTACACGAATTTAGATCAACAGCATGGCGATATGAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCACTGAAGAATCAAAACATGAGTCTGACGAAAGCATCCGTTACCTATGGCATCCCCTCAACCACACTCTGGCAAAGGGCCCACCGCATGGGCATCGAAACACCGAAGAAGGAAGGAGGCACCAAGTCATGGAACGAAGACTCCCTTAACAATGCACTGGAGGCTTTGCGTTCAGGACAAATATCGGCCAACAAAGCATCGAAAGCCTTTGGTATACCTTCGTCGACGTTGTATAAAATAGCGCGACGTGAAGGTATACGATTGGCAGCACCGTTTAATGCCGCCCCCACCACTTGGACACCAGAAGATTTGGAACGGGCCTTGGAAGCAATACGCGCTGGTCATACGTCGGTACAGAAGGCAAGTGCAGAATTTGGTATCCCCACAGGTACATTATACGGCCGTTGCAAACGTGAGGGCATTGAACTATCGCGTTCAAATCCCACACCCTGGTCAGAAGATGCTATGAATGAAGCTTTAAATTCTGTGCGCATTGGCCAAATGTCTATAAATCAAGCTGCTATCCACTACAATCTACCGTATAGTTCTCTTTATGGCCGTTTTAAACGTGGCAAATATGATGTGGCAAATACAAGCGGAGCTTCCATTAACAATACATCGGGCAATACCTCTGGTAGCATTGAAATTATTGAACATAGTCAAGAGAATTCGtTGCCTATGTTTCAGCAACAATTCCAATATAGTCCATCGCCCCATCAACAGCAACACGGTGGCAGTAGTACACCGCAACAAAGCCAGACGCCACAGCATCTACAGCAACATGTTGTGCACATACAACATCATCAGCAACAAGGCCAACATGCGCAGCATATTCAACAGCAAGATGTTGTAACCTCGTCAAgccaacagcagcagcaacaacatgcCAGCAATTCGGCAGCCTcccaacagcagcaacaaattCAGCAAATTTACCATCATCACAGTACACCCGAAAGAAGTTGA
- Protein Sequence
- MVTYNQRDFTVVPGGLLRTAEQLKIKGLCETAENADDLNDTATATITVSENIQQAVVGNIVNATVVPGQQSPPIPHQQHQQLTTTAVLSPGSAQQLAAAGQLITSTPATTPQQHQQQQQQQQQRKSRVRKRSKSPDLQLQQQNQQQALLIQNQNSIVSLQQTSAGNYIPVSGVQTVTTSAAIGQHHQQQQHTTTIVTADDSDSDKPTLQKICKTEASSASPASTSSASASNNAGGLTSVTASGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPSEPLDIDNHLAQHMIQRLDQSPMHTIHHQTGDESNSNLVHIKSEVIDVKQQQAQQQAAVAAHHQAQQQQLHAQQLAAAQGQTHQQQQQQLAHQQQHQAHQQHHQQHAHQQHHQEITGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSDDSMMIANGSPHDQNEPHYTNLDQQHGDMKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSGASINNTSGNTSGSIEIIEHSQENSLPMFQQQFQYSPSPHQQQHGGSSTPQQSQTPQHLQQHVVHIQHHQQQGQHAQHIQQQDVVTSSSQQQQQQHASNSAASQQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00258784;
- 80% Identity
- -