Pinf023502.1
Basic Information
- Insect
- Pegoplata infirma
- Gene Symbol
- -
- Assembly
- GCA_963921195.1
- Location
- OY992538.1:100172588-100196178[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.4e-11 2e-07 32.0 0.0 1 38 539 577 539 582 0.89 2 4 2.3e-13 6.1e-10 40.0 0.0 2 39 594 631 593 634 0.94 3 4 2.7e-17 7.2e-14 52.6 0.0 1 45 648 693 648 693 0.98 4 4 2.7e-19 7.2e-16 59.0 0.0 1 45 700 745 700 745 0.97
Sequence Information
- Coding Sequence
- ATGAGTTGGTCATCATCTTATCGTAATGGTCTTTTACGTACCGCTGAACAGTTGAAAATCAAAGGACTTTGCGAAACAGCAGAAAATGCCGATGATTTAAATGATGCTGCCACAGCAACAATAACAGTATCAGAAAATATACAGCAAGCTGTAGTTGGTAATATTGTGAACACAACCGTATTACCAGGTCAGCAATCGCCTCCTATACCCCACCAATCAcatcaacagcagcagcaacaacaacagcagcaacaacagcagcaacaacagcaacaacaacagcagcagcaacaacaattaGCAAATACAGCCGTATTAAGTCCTGGTAGTGCACAACAATTGGCATCTACAGGACAATTGGTGACATCCACACCTATCAGTACTCCACAacatcagcagcaacaacaacagattGGTCGTAAATCAAGAGTGCGTAAACGTTCTAAATCACCGGATTTACAATTACAGCAACAGAATCAACAACATCCACAGGCAATATTAATACAAAATCAAAATCAAGCTGCTATTGTAAGTCTACAACAGACATCCGCTGGTAATTATATACCCGTATCGGGAGTACAAACGGTAACGACAAGTGTAGGTACGaaccaacaacagcaacaacaacagaccACTATTGTAACGGCAGACGATTCTGATTCGGATAATAAACCCACATTacagaaaatttgtaaaactgAAGCAGCAGCAGCTTCACCGGCGTCCACATCTTCGGCATCAGCATCAAATAATGCTGGTGGTGTAACTGCTGTATCAGCACCGGGAACAGCAATTGTAACACAAATTGTAGTAGCAAGAGACGGAAAAGATAAAAATATGACTAGTTTAGGCATGGGCATGaaTGGCGGCATTCTGGGAGTTCCTATGGGCTTTTTAGATTTTGCTGCTGAACCACCGGCTCCATCAGCAACACCTGTCACGGTCACGGAACATGTAGATTTGTCATGTAACCCGAATACGGATACCAGAGATTTATCAAATCCCTCAGAACCGCTCGATATTGATAATCATTTGGCCCAACATATGATACAAAGGCTCGATCAATCTCCCATGCATTCAATACATCATCAAACTGGTGACGAATCAAATTCGAATCTGGTGCAACACATAAAAAGTGAAGTTATAGATGccaaacaacaacagcagcagcaacagcaggcccagcagcagcaacaacaacagcagcaacaagcaGCCGCCCACCATCAAGCTCAACAACAACAGTTGCATGCACAACAATTATCACAGGGTCAAACACATCAGCAACAGCAAGCAGCAcatcaacagcagcaacaacaagccCATCAACAACACCACCAACAGTCCCACCAACAACATCATCAGGAAATTTCTGGAGCCACCGTCATGGAGATTGATCCGAGCCAAATAAAACATGAGCCGGGAATGATAATCACACCGGAAATTGTTAACATGATGACAACAGGGCACATGGACATGTATAATTCCGACACGAGCGATGATTCTATGATGATTGCCAATGGTTCACCACATGATCAAAACGAACCCCATTACACAAATTTAGATCAACAACATGGCGATATGAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAATATGAGCCTGACGAAAGCATCCGTTACCTATGGCATCCCCTCAACTACCCTGTGGCAAAGGGCACATCGCATGGGCATTGAGACACCGAAGAAGGAAGGAGGTACCAAATCATGGAATGAGGATTCCCTTAACAATGCCCTGGAAGCTTTGCGATCTGGACAGATATCAGCGAATAAAGCCTCGAAAGCCTTTGGTATACCTTCGTCAACGTTGTACAAAATAGCACGACGTGAAGGTATACGATTGGCAGCGCCGTTCAATGCCGCACCCACCACCTGGACGCCGGAAGATTTAGAGAGGGCCTTGGAAGCTATACGTGCTGGGCATACATCGGTACAGAAGGCGAGCGCTGAATTTGGTATACCCACAGGAACATTATATGGTCGTTGTAAGCGAGAAGGTATTGAGTTATCTCGTTCAAATCCTACACCCTGGTCTGAGGATGCTATGAATGAAGCTTTAAATTCTGTGCGCATTGGCCAAATGTCTATCAATCAAGCTGCTATCCATTATAATTTACCCTACAGTTCTTTATATGGTCGTTTTAAGCGTGGCAAATATGATGTATCCAATATAAGTGGAGTAACTTCTCTTAATAATACATCGGGCAATACCTCCGGTAGCATTGAAATCATTGAACATAGTCAAGAGAATTCGCAACAATTCCAATATAGTCCATCACCGCATCAGCAACACGGTGGTGGTAGTAGTACTCCGCAACAAAGCCAAACACCACAACATTTACAGCAACATGTGGTGCAtatacaacagcagcagcaacatcatCAACAACAGTCCCAACATGCGCAACATATCCAGCAGCAACAAGATGTTGTTACCTCATCCagtcaacaacaacagcagcaacaagtccaacaacagcagcaacaacatgcCAGCAATTCAGCAGCCTCACAGCAACAACAAATTCAACAAATTTATCATCATCACAGTACACCCGAGAGAATATCAGCTGCAGCATCTTCGAATCTAAGTGGCAGTAGTAGTCATACTACAACAACACATCATCATAGTGTAACAACACTTGCTGGCCATAACAGCAGCAAACGTAAGAAAACGTCTAAAACAAAACGTTAA
- Protein Sequence
- MSWSSSYRNGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNTTVLPGQQSPPIPHQSHQQQQQQQQQQQQQQQQQQQQQQQQQLANTAVLSPGSAQQLASTGQLVTSTPISTPQHQQQQQQIGRKSRVRKRSKSPDLQLQQQNQQHPQAILIQNQNQAAIVSLQQTSAGNYIPVSGVQTVTTSVGTNQQQQQQQTTIVTADDSDSDNKPTLQKICKTEAAAASPASTSSASASNNAGGVTAVSAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAAEPPAPSATPVTVTEHVDLSCNPNTDTRDLSNPSEPLDIDNHLAQHMIQRLDQSPMHSIHHQTGDESNSNLVQHIKSEVIDAKQQQQQQQQAQQQQQQQQQQAAAHHQAQQQQLHAQQLSQGQTHQQQQAAHQQQQQQAHQQHHQQSHQQHHQEISGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSDDSMMIANGSPHDQNEPHYTNLDQQHGDMKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVSNISGVTSLNNTSGNTSGSIEIIEHSQENSQQFQYSPSPHQQHGGGSSTPQQSQTPQHLQQHVVHIQQQQQHHQQQSQHAQHIQQQQDVVTSSSQQQQQQQVQQQQQQHASNSAASQQQQIQQIYHHHSTPERISAAASSNLSGSSSHTTTTHHHSVTTLAGHNSSKRKKTSKTKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00892647; iTF_00370891; iTF_00716557;
- 80% Identity
- -