Mwes052152.1
Basic Information
- Insect
- Merzomyia westermanni
- Gene Symbol
- -
- Assembly
- GCA_949987695.1
- Location
- OX465293.1:121171242-121200279[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.6e-10 2.3e-07 32.0 0.0 1 38 562 600 562 605 0.89 2 4 8.2e-13 7.1e-10 40.1 0.0 2 39 617 654 616 657 0.94 3 4 9.7e-17 8.5e-14 52.6 0.0 1 45 671 716 671 716 0.98 4 4 3e-18 2.6e-15 57.5 0.0 1 43 723 766 723 768 0.96
Sequence Information
- Coding Sequence
- ATGGATGCCGGGGCTGGTTACTGGCTGCGAACCATTTGGTTGGTCATAGATAGTGCAGTCGCAATTACTGTTGAACTGTTGCAAACTGCAACATTCCCACAGGCACCAGCTTTAAGCAAATCTGCCTCACCGGAAAGCAAGGATATATCAGCGCAAGCACCGGCAGGTCCTCAACAACATCTACACGGAggTTTATTGCGTACTGCCGAACAGTTAAAAATAAAGGGACTTTGTGAAACAGCAGAAAATACAGATGATGTAAACGACGCCGCTACTGCCACAATTACAGTATCAGAAAATATTCAACAAGCAGTAGTCGGTAACATTATCAACACTACTGTATCGGCTGGTCAGGCCTCGCCTGGTACTCAACAGCAGCAAATAACAACCAACACAGCAGTGCTCACGCACAACATCGCAAACGTGACTGCTGCAAATTCGCAGCAAATTGGGTCTACGGCTACAAATAATGCCGGCCAGTTGGTAACCGCTGGTTCATCTACTCAACAGCCACAAATAGGACGTAAATCTCGAGTTCGTAAGCGCTCAAAGTCTCCAGATCTACAACAAGTACAAAGCGCTCAGCAGCAGATCCAACAGCACCCACAAACAATTTTGATTCAAAACCAAAATCAGGCTGCGATCGTAAGTTTGCAACAGACATCGTCCGGAAATTATATACCAGTATCAGGGGTACAAACCGTTACTACCAGTGTAGCGGGACAGCAACAAGCGGTTATAACCAGTGACGAGTCGGATACGGACAAACCCGCACTCTCAAAAATCTGTAAAACAGAAACATCTTCGGAGTCACCCACTTCTAGCGCATCTGGTGTATCGGCTTCGAATAATGCTGGAAGTGTAACAACTGTTTCAGCCCCCGGCACAGCTATTGTTACACAGATTGTAGTAGCACGAGAcggaaaagataaaaatatgaCCAGTTTAGGAATGGGAAtgAATGGCGGAATTCTTGGAGTGCCTATGGGCTTTTTAGACTTTGCACCGGAGCCACCAGCACCTTCAGCAACACCTGTCACGGTAACGGAGCATGTTGATTTGTCTTGCAATCCTAATACCGATACTCGAGATTTATCAAACCCCACCGAAGCACTTGATATTGACAATCATTTAGCTCAACATATGATTCAACGTTTGGATCAATCCCCAATGCATACTATACATCATCAAACTGGCGATGAAAGCAATTCAAATTTGGTTCAACATATTAAGAGTGAAGTGATTGATGCAAAACagcagcaggtacagcaacagCAGCATCATCAGCAACAGCAGCATCAATTGCATGCACAACAACTTACATCGAATCAggcacaacagcaacaacatcaacaacagcatCAGTTACATCAACAACAATCTTCCCATTCACATTCATCTCATACTCAACATCAACAAGCACACCCACATCAGGATATATCTGGTGCCACTGTCATGGAAATCGATCCAAGTCAAATAAAACACGAACCAGGCATGATTATAACACCGGAAATTGTTAATATGATGACAGCAGGACATATGGATATGTATAACTCAGATACTAGCGAGGATTCAATGATGATAGCAAATGGCTCTCCTAATGATCAAAATGAGCCACATTACACCAATTTGGACCAACCACATGGTGATAGTAAAGGTCAGTTTAATGGTCCCAAAACTTGGACTCAAGATGatatgaattcagctttagatGCATTGAAGAACCAAAATATGAGTCTTACAAAAGCATCAGTAACATATGGCATCCCATCTACAACTTTATGGCAACGTGCCCATCGTATGGGTATCGAAACGCCGAAAAAAGAAGGTGGTACAAAATCATGGAATGAAGATTCTTTAAATAATGCATTAGAAGCCCTTCGCTCTGGGCAAATATCGGCAAACAAAGCTTCAAAAGCATTTGGTATACCTTCTTCCACGCTGTATAAAATTGCTCGACGGGAAGGTATTCGCCTAGCCGCACCATTTAATGCTGCTCCAACAACGTGGACTCCGGAAGATTTAGAACGAGCATTAGAAGCAATACGTGCTGGTCACACGTCCGTTCAAAAAGCCAGTGCCGAATTTGGAATTCCCACGGGAACATTATATGGCCGCTGTAAACGGGAAGGTATTGAATTGTCTCGTTCGAATCCGACACCTTGGTCAGAGGACGCAATGAATGAAGCTCTCAATTCGGTCCGAATTGGACAGATGTCTATCAACCAGGCAGCGATTCACTACAACCTACCCTATAGCTCCCTATATGGTCGATTTAAGCGAGGAAAATATGACGTGGCAAACACCAGTAGCGCGTCCATTAATAACACATCAGGAAATACTTCGGGTAGCATCGAGATTATTGAACATAGTCAAGAAAACTCGTTGCATGTATTTCAGCAACAGTTCCAGTATAGCCCGTCGCCACATCAACAACCACAGCATGGAGGTCAAACTCAATCTCAGACATCTCAACACTTAACCCAACATGTAGTACATATTCAACAATCACAGGCTCATCATCAGCAAGTTCACGGTCAGCAGCAACAACATATCCAACAGCAACAAGATGTTGTAACATCCAGTAGCCAGGTAGCTCATAGCAGCACATCTGCtgggcagcaacaacaaattcaacaaatttaTCACCATCACAGCACGCCTGAAAGAAGTTGA
- Protein Sequence
- MDAGAGYWLRTIWLVIDSAVAITVELLQTATFPQAPALSKSASPESKDISAQAPAGPQQHLHGGLLRTAEQLKIKGLCETAENTDDVNDAATATITVSENIQQAVVGNIINTTVSAGQASPGTQQQQITTNTAVLTHNIANVTAANSQQIGSTATNNAGQLVTAGSSTQQPQIGRKSRVRKRSKSPDLQQVQSAQQQIQQHPQTILIQNQNQAAIVSLQQTSSGNYIPVSGVQTVTTSVAGQQQAVITSDESDTDKPALSKICKTETSSESPTSSASGVSASNNAGSVTTVSAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPNTDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHTIHHQTGDESNSNLVQHIKSEVIDAKQQQVQQQQHHQQQQHQLHAQQLTSNQAQQQQHQQQHQLHQQQSSHSHSSHTQHQQAHPHQDISGATVMEIDPSQIKHEPGMIITPEIVNMMTAGHMDMYNSDTSEDSMMIANGSPNDQNEPHYTNLDQPHGDSKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSSASINNTSGNTSGSIEIIEHSQENSLHVFQQQFQYSPSPHQQPQHGGQTQSQTSQHLTQHVVHIQQSQAHHQQVHGQQQQHIQQQQDVVTSSSQVAHSSTSAGQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00192007;
- 80% Identity
- -