Tdal023401.2
Basic Information
- Insect
- Teleopsis dalmanni
- Gene Symbol
- -
- Assembly
- GCA_002237135.5
- Location
- CM026971.3:62360829-62370380[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.6e-11 1.8e-07 32.0 0.0 1 38 471 509 471 514 0.89 2 4 1.5e-13 4.9e-10 40.3 0.0 2 39 526 563 525 566 0.94 3 4 1.8e-17 5.8e-14 52.8 0.0 1 45 580 625 580 625 0.98 4 4 3.2e-20 1e-16 61.6 0.0 1 45 632 677 632 677 0.97
Sequence Information
- Coding Sequence
- atggcagcgaatgGACTTTTACGTACTGCAGAacagttaaaaattaaaggaCTTTGCGAGACAGCAGAAAATACTGACGATTTGAACGACGCAGCTACAGCTACTATCACAGTATCTGAAAATATACAGCAAGCAGTTGttggaaatattgtaaatgcGGTAGCGCCTGGACAACCGTCCCCAAAcactcaacaacaacaacatcaacagcagaTTGCAGCAAATGCTGCTGTGTTATCACACGGAATCGGTAACGTTAACGCTGCAAATGCACAGCAATTAGCTGCAGCAGCTGCTAGCGGACAGTTAATAGCATCCAATACACAGCAGTTGGTACGAAAGTCCCGTGTACGAAAGCGCTCTAAGTCGCCTGActtacaacaacatcaacatcctcaaactatattaatacaaaatcaaaatcaaactGCTATCGTAAGTCTACAACAATCTGGTAATTTTATACCAGTTTCTGGGGTTCAAACAGTATCCACAAGCGTTGGAGGACAGACACAAACAGTTATTACTGGTGACGATTCGGATTCGGACAAAccattacaaaaaatttgtaaaaccgAAACTTCACATACTTCACCTACATCAAATTCATCTAGTTCGGCATCCAATAATGCTGGTGGTGTAACCACAGTAACAGCACCTGGCACTGCGATCGTCACACAAATTGTAGTAGCACGAGACGGAAAAGATAAAACAATGACTAGTTTAGGCATGGGCATGaacGGTGGTATCCTTGGCGTTCCAATGGGATTCCTGGATTTCGCACCGGAACCGCCAGCCCCATCTGCAACACCAGTTACTGTTACTGAACACGTCGACTTATCATGTAACCCCAGCACAGACACCAGAGATTTATCAAatccCACCGAACCACTTGACATTGACAATCATCTAGCTCAACATATGATACAAAGGCTCGATCAATCACCGATGCATACTATTCATCATCAAACTGGCGATGAGAGCAATTCAAATTTAGTGCAACACATTAAAAGTGAAGTTATAGAAGCCAAACAACAGCATCAACAGCATCATCAATCCCAACATCAGCTGCATGCCCAGCAACTGGTTCAAAGtcatcaacatcaacagcaagcccaacagcaacaccaacaacatcaacagcacCAACAAACTCATCAGGAAATAACTGGAGCGACTGTTATGGAAATTGATCCGAGCCAGATAAAACATGAACCGGGCATGATAATAACACCTGAGATTGTAACTATGATGAATACTGGGCATATGGaTATGTATAATTCAGATACAAGTGAGGATTCTATGATGATTGCAAACGGTTCACCAAATGATCAGAATGAGCCACATTACACCAATTTGGACCAACAACATGGCGATAACAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGAAGATATGAATTCTGCTTTAGATGCccttaaaaaccaaaatatgaGCCTGACGAAGGCTTCGGTTACATATGGCATTCCGTCTACAACACTTTGGCAACGTGCCCATCGAATGGGCATTGAAACGCCAAAAAAAGAAGGCGGAACCAAATCATGGAATGAAGATTCTCTTAATAACGCACTGGAAGCATTACGCTCTGGTCAAATATCAGCTAATAAAGCATCAAAAGCCTTTGGCATACCTTCATCGACACTGTATAAGATTGCACGTCGTGAAGGTATACGTTTAGCTGCACCATTTAATGCTGCGCCAACTACATGGACGCCTGAAGATTTGGAAAGAGCATTAGAGGCAATAAGAGCTGGTCATACATCTGTCCAGAAAGCTAGTGCTGAATTTGGTATACCTACAGGAACTTTGTATGGTCGTTGCAAACGTGAGGGTATAGAATTATCCAGATCAAATCCAACGCCATGGTCGGAGGATGCAATGAACGAAGCTTTAAATTCAGTACGGGTTGGTCAAATGTCTATAAATCAGGCAGCAATACATTATAATCTGCCCTATAGTTCTTTGTATGGCCGATTCAAGCGCGGTAAATACGATGTTTCAAACACTAGTGGGTCCTCATTAAATAATACATCTGGAAATACATCAGGAAGCATTGAAATCATCGAGCATAGTCAAGAGAATTCGTTACATATGTTTCAGCAACAATTCCAGTACAGTCCATCTCCCCATCAGCACAGCACACCACAACAGCCACAAACACCTCAGCATCTGCAACATGTTGTACACATCACCCAACAGCAACATCATCAGCAACATGGCCAACATATCCAGCAACAAGATGTTGTGACATCGAGTAGCCAAGTGCCGCACTCAAGCGCTGGTGCtgtacaacagcaacaaattcaGCAAATTTATCACCACCATAGCACCCCCGAAAGAAGTTGA
- Protein Sequence
- MAANGLLRTAEQLKIKGLCETAENTDDLNDAATATITVSENIQQAVVGNIVNAVAPGQPSPNTQQQQHQQQIAANAAVLSHGIGNVNAANAQQLAAAAASGQLIASNTQQLVRKSRVRKRSKSPDLQQHQHPQTILIQNQNQTAIVSLQQSGNFIPVSGVQTVSTSVGGQTQTVITGDDSDSDKPLQKICKTETSHTSPTSNSSSSASNNAGGVTTVTAPGTAIVTQIVVARDGKDKTMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQHMIQRLDQSPMHTIHHQTGDESNSNLVQHIKSEVIEAKQQHQQHHQSQHQLHAQQLVQSHQHQQQAQQQHQQHQQHQQTHQEITGATVMEIDPSQIKHEPGMIITPEIVTMMNTGHMDMYNSDTSEDSMMIANGSPNDQNEPHYTNLDQQHGDNKGQFNGPKTWTQEDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVSNTSGSSLNNTSGNTSGSIEIIEHSQENSLHMFQQQFQYSPSPHQHSTPQQPQTPQHLQHVVHITQQQHHQQHGQHIQQQDVVTSSSQVPHSSAGAVQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- -
- 80% Identity
- -