Btry012926.1
Basic Information
- Insect
- Bactrocera tryoni
- Gene Symbol
- lolal
- Assembly
- GCA_016617805.2
- Location
- NC:29613795-29672282[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3e-11 5.8e-08 32.0 0.0 1 38 602 640 602 645 0.89 2 4 9.2e-14 1.8e-10 40.0 0.0 2 39 657 694 656 697 0.94 3 4 1.1e-17 2.2e-14 52.5 0.0 1 45 711 756 711 756 0.98 4 4 3.1e-19 6.1e-16 57.5 0.0 1 43 763 806 763 808 0.96
Sequence Information
- Coding Sequence
- ATGGCATCGAGAAGTCACCAGTATTTTAGTTTGCGTTGGAACAATTACCAAAACACCATGACTTCGGTGTTCCAGCAATTGCGAGAAGACTTATCTTTCGTGGATGTGACCCTTTCCTGTGAGCATGGTTCCCTAAAAGCACACaagGTTGTTCTATCCGCCTGCTcatcatattttcaaaaactgctTTTGGAAAATCCCTGCAAACATCCCACCATCATACTTCCCGGCGATATTATATTCACGGATTTGAAGACGATTATTGATTTTGTTTATCGCGGCGAAATTGATGTCACCGAATCTGAATTGCAGGGTTTATTACGTACAGCCGAACAGCtgaaaataaaaggactttGTGAGACGGCCGAAAACACAGACGATTTGAACGACTCGGCTACAGCTACAATTACAGTATCGGAGAATATACAGCAAGCCGTCGTTGGAAATATCGTTAATGCCACAGTAGCAACGGGTCAACTCTCACCCAATATACCACATCAAtcgcaacagcagcaacaacagatCGCTACTAATACAGCGGTGCTCACGCATAATATTGGCAACGTGACCACTGCAAATACACAACAAATTGGTTCAGCCACTACGAATGTCGCCGGACAGTTAGTTAGTGCAGGCACATCGGTACAACATCAACAGATTGGACGTAAATCTCGTGTACGTAAGCGTTCAAAATCTCCAGatatacaacaacaagtacagagtacacaacaaccacaaacaattttaatacaaaatcaaaatcaagccGCTATTGTTAGTTTACAACAGACGTCGTCTGGTAATTATATACCGGTATCCGGTGTACAAACGGTTAGCACTAGCGGTGGTGGGCAACAGCAGACGGTAATCACCGGTGACGATTCGGATACGGATAGGCCGGGGAAGATCTGTAAGACAGAAACAGCGTCAGCGTCACCTGCGTCCAGCGTATCTGGTGTATCGGGAACGAATAATGCTGGCAGCGTAACGACCGTTGCAGCACCAGGCACAGCGATTGTAACGCAGATTGTAGTAGCACGAGACGGCAAAGATAAAAATATGACTAGTTTAGGAATGGGAATGaatggCGGAATTCTTGGAGTGCCAATGGGCTTTTTAGATTTTGCACCAGAACCTCCAGCACCCTCAGCCACACCGGTAACAGTAACGGAGCATGTCGATTTATCATGCAATCCAAATACCGACACTCGAGATTTATCAAACCCCACCGAAGCACTGGACATCGACAATCATTTAGCCCAACACATGATTCAACGGCTTGATCAATCTCCGATGCATGCTATTCATCATCAGACTGGTGATGAAAGCAATTCGAATTTAGTACAGCATATTAAGAGTGAGGTGATTGAtgcgaaacaacaacaacaagtacagcaacagcaacatcatcaacagcaacaacatcaattGCATGCTCAACAACTCTCACAAAATCAagtacagcaacagcaacaccaacagcatCAAGTACatcaacaacaaacagcacACTCACATTCAACACACgtccaacaacaagcacaatCACATCAGGACCTAAGCGGAGCAACAGTAATGGAAATCGATCCAAGCCAAATAAAACATGAACCCGGAATGATCATAACACCGGAAATTGTTAATATGATGACCACTGGACATATGGATATGTATAATTCTGATACAAGTGAGGATTCAATGATGATAGCAAATGGCTCACCAAACGATCAAACTGAGCCACATTATACTAACTTAGACCAACAGCACGTGGATGGTAAAGGTCAGTTTAATGGTCCAAAAACTTGGACTCAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAATATGAGTCTTACAAAAGCATCAGTTACATATGGTATACCATCAACCACTTTATGGCAACGTGCCCATCGTATGGGCATCGAAACGCCAAAGAAGGAGGGTGGTACGAAATCATGGAATGAAGATTCTTTGAATAATGCTTTAGAAGCCCTACGTTCTGGGCAAATATCAGCAAATAAAGCGTCCAAAGCCTTTGGTATACCATCCTCGACATTATATAAAATTGCGCGACGCGAAGGCATACGCTTGGCGGCACCCTTTAATGCGGCACCCACAACGTGGACACCGGAAGATTTAGAGCGTGCATTAGAAGCAATACGCGCTGGTCATACGTCCGTACAAAAGGCCAGCGCTGAATTTGGCATACCAACGGGCACCCTATACGGTCGTTGCAAGCGCGAAGGCATTGAGTTATCACGCTCGAATCCAACACCATGGTCGGAAGACGCAATGAATGAAGCTTTGAATTCAGTTCGCATTGGTCAGATGTCTATTAATCAGGCCGCAATTCACTATAACCTTCCCTACAGCTCTTTGTATGGTCGCTTTAAGCGTGGAAAGTATGACGTTACTAATACCAGTAGCACCTCCATTAATAATGCATCAGGAAATACTTCGGGAAGCATCGAAATTATCGAACATAGTCAAGAAAACTCGTTACATATGTTTCAGCAACAGTTCCAGTATAGTCCGTCGCCACATCAACAACCTCAGCATGGCGGTCAAACTCAATCGCAGACACCTCAACATATAACCCAACATGTTGTACACATTCAGCAACCACAGACtcatcatcagcagcaacaagtacatgctcaacaacagcaacatatcCAGCAGCAACAAGATGTTGTAACATCCAGCAGCCAGGTGGCACATAGCAGTGCAGCTGTtgggcagcagcaacaacaacaaattcaacaGATCTATCATCATCACAGCACGCCGGAAAGAAGTTGA
- Protein Sequence
- MASRSHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSSYFQKLLLENPCKHPTIILPGDIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENTDDLNDSATATITVSENIQQAVVGNIVNATVATGQLSPNIPHQSQQQQQQIATNTAVLTHNIGNVTTANTQQIGSATTNVAGQLVSAGTSVQHQQIGRKSRVRKRSKSPDIQQQVQSTQQPQTILIQNQNQAAIVSLQQTSSGNYIPVSGVQTVSTSGGGQQQTVITGDDSDTDRPGKICKTETASASPASSVSGVSGTNNAGSVTTVAAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPNTDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHAIHHQTGDESNSNLVQHIKSEVIDAKQQQQVQQQQHHQQQQHQLHAQQLSQNQVQQQQHQQHQVHQQQTAHSHSTHVQQQAQSHQDLSGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSEDSMMIANGSPNDQTEPHYTNLDQQHVDGKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVTNTSSTSINNASGNTSGSIEIIEHSQENSLHMFQQQFQYSPSPHQQPQHGGQTQSQTPQHITQHVVHIQQPQTHHQQQQVHAQQQQHIQQQQDVVTSSSQVAHSSAAVGQQQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00192007;
- 80% Identity
- iTF_00193677;