Apur041354.1
Basic Information
- Insect
- Anomoia purmunda
- Gene Symbol
- -
- Assembly
- GCA_951828415.1
- Location
- OX639997.1:1186667-1204952[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.4e-10 2.8e-07 32.0 0.0 1 38 580 618 580 623 0.89 2 4 1.1e-12 8.7e-10 40.0 0.0 2 39 635 672 634 675 0.94 3 4 1.3e-16 1e-13 52.6 0.0 1 45 689 734 689 734 0.98 4 4 3.8e-18 3.1e-15 57.4 0.0 1 43 741 784 741 786 0.96
Sequence Information
- Coding Sequence
- ATGAGCGGAGACGACGCGCAACATGACTACGCAACCAAGTGCCAAGTCGAGTTTGATGATGTCTTTGAATGCTTGGGCATCGACACTGCCTGCTGCTGCTATTGCTTGCTGCACACGTTGCACACTAGCTTAGCTATTAGCTATGAGAGTATACCATTGCATTGGTGCAGAGTATCGATGCCGGGTCCGCTGCTGACTGGAATCCGTTTGggCTTGCTACGTACTGCCGAACAGTTGAAAATAAAAGGGCTCTGTGAAACAGCTGAAAACACAGACGATTTGAACGACGCAGCTACAGCTACAATTACAGTATCGGAGAATATACAACAAGCAGTTGTTGGTAACATCGTCAACACTACAGTATCTCCAGGTCAAGCTTCTCCAAACACacaacatcagcagcagcagcagcaacaacaacaacaacaaatttcaaCGAATACGGCAGTGCTGACGCACAATATAAGTAACGTGACCGCTGCCACCAATCTACAGCAAATTGGTTCTACGGCAACAAATGCTGTTGGCCAGCTAGTAACTCCAGGCTCATCATCTCAACAGCCACAAATAGGACGTAAATCTCGCGTTCGTAAGCGCTCAAAATCACCAGATATACAACAGCAAGTACATAATACACAACAACAGGTCCAACAGCATccgcaaacaattttaattcaaaatcaaaatcaaactgCAATCGTTAGTTTACAACAAACCCCATCTGGAAATTATATACCTGTATCTGGAGTGCAAACCGTAACCACTAGTGTAGCTGGACAGCAGCAGGCGGTTATCACCGGTGACGAGTCTGATCCGGACAAACCGGCGCTATCGAAAATCTGCAAGACAGAAACAGCGTCAGCGTCACCTGCATCCAGCGGCTCTGGTGTATCGGGTTCGAATAATGCTGGAAGCGTAACGACTGTTGCAGCACCAGGGACAGCGATTGTTACGCAGATTGTAGTGGCTCGAGACGGCAAAGATAAAAATATGACTAGCTTAGGAATGGGAATGAATGGCGGAATTCTTGGAGTGCCAATGGGCTTTTTAGATTTTGCACCAGAGCCACCAGCACCTTCAGCAACACCAGTAACTGTAACGGAGCATGTTGATTTATCTTGCAACCCCAACACCGATACTCGAGATTTATCAAACCCCACCGAAGCACTTGACATTGACAATCACTTGGCCCAGCATATGATTCAACGGCTTGATCAATCTCCGATGCATGCTATTCATCATCAAACCGGCGATGAGagcaattcaaatttaattcaacataTTAAGAGTGAGGTGATTGAggcgaaacaacaacaacaagtacaacaacaacagcatcatcagcaacagcaacatcaatTACATGCACAACAACTGACACAGACACAagcacagcaacagcaacatcaacaacaacatcaagtaCATCAACAACAAACTTCTCATTCACACTCAACACATAGCCAACAACAAGCACAATCACATCAGGACATGTCCGGTGCAACAGTAATGGAAATTGATCCGAGCCAAATAAAACACGAGCCTGGAATGATCATAACTCCGGAAATAGTTAATATGATGACAACTGGACATATGGATATGTATAATTCAGATACAAGTGAGGATTCAATGATGATAGCAAATGGCTCGCCTAACGATCAAAATGAGCCACATTATACTAATTTGGACCAACAACATGTGGATAGTAAAGGTCAGTTTAATGGTCCCAAAACTTGGACTCAAGATGATATGAATTCAGCTTTAGATGCGTTGAAGAATCAAAATATGAGCCTTACAAAGGCTTCAGTTACATATGGCATACCATCTACAACTTTGTGGCAACGTGCCCATCGTATGGGCATTGAGACCCCAAAGAAGGAAGGTGGTACCAAATCATGGAATGAAGATTCTTTAAATAACGCTTTAGAGGCCCTTCGTTCTGGGCAAATTTCGGCAAATAAAGCGTCTAAAGCCTTTGGAATACCTTCGTCGACACTATATAAAATTGCGCGACGTGAAGGTATACGTTTAGCAGCACCTTTTAATGCGGCTCCAACAACGTGGACTCCGGAAGATTTAGAACGAGCATTAGAAGCAATACGTGCTGGTCATACGTCCGTTCAAAAAGCAAGTGCCGAATTTGGAATTCCTACAgGAACACTTTACGGACGATGCAAACGTGAAGGTATTGAATTATCCCGTTCGAATCCAACACCTTGGTCAGAAGATGCAATGAATGAAGCTCTGAATTCAGTACGAATTGGTCAGATGTCTATTAACCAAGCCGCGATTCATTACAACCTCCCCTATAGCTCTTTGTACGGCCGCTTTAAACGAGGAAAATATGACGTGGCTAACACCAGCAGCACCTCCATTAATAATACATCAGGAAACACATCGGGAAGCATCGAAATTATCGAACATAGTCAAGAAAACTCGTTGCATATGTTTCAGCAACAGTTCCAGTATAGTCCGTCGCCACATCAACAGCCTCAGCATGGCGGTCAAACTCAATCACAGACGCCTCAACATTTAACTCAACATGTTGTACACATCCAGCAATCACAGACtcatcatcagcagcagcaaGTGCACgcccaacagcaacaacatatccaacagcagcagcagcaggatGTTGTCACATCGAGCAGTCAGGTGGCACACAGCAGTGCAGCGGCTggacagcagcaacaacaaattcaaCAGATCTATCATCAACATAGCACGCCGGAAAGAAGTTGA
- Protein Sequence
- MSGDDAQHDYATKCQVEFDDVFECLGIDTACCCYCLLHTLHTSLAISYESIPLHWCRVSMPGPLLTGIRLGLLRTAEQLKIKGLCETAENTDDLNDAATATITVSENIQQAVVGNIVNTTVSPGQASPNTQHQQQQQQQQQQQISTNTAVLTHNISNVTAATNLQQIGSTATNAVGQLVTPGSSSQQPQIGRKSRVRKRSKSPDIQQQVHNTQQQVQQHPQTILIQNQNQTAIVSLQQTPSGNYIPVSGVQTVTTSVAGQQQAVITGDESDPDKPALSKICKTETASASPASSGSGVSGSNNAGSVTTVAAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPNTDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHAIHHQTGDESNSNLIQHIKSEVIEAKQQQQVQQQQHHQQQQHQLHAQQLTQTQAQQQQHQQQHQVHQQQTSHSHSTHSQQQAQSHQDMSGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSEDSMMIANGSPNDQNEPHYTNLDQQHVDSKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSSTSINNTSGNTSGSIEIIEHSQENSLHMFQQQFQYSPSPHQQPQHGGQTQSQTPQHLTQHVVHIQQSQTHHQQQQVHAQQQQHIQQQQQQDVVTSSSQVAHSSAAAGQQQQQIQQIYHQHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00192007;
- 80% Identity
- -