Aobl021152.2
Basic Information
- Insect
- Anastrepha obliqua
- Gene Symbol
- -
- Assembly
- GCA_027943255.1
- Location
- JAPTHQ010000059.1:1225646-1242497[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.9e-11 1.8e-07 32.1 0.0 1 38 531 569 531 574 0.89 2 4 3.1e-13 5.6e-10 40.1 0.0 2 39 586 623 585 626 0.94 3 4 3.7e-17 6.6e-14 52.7 0.0 1 45 640 685 640 685 0.98 4 4 1.4e-18 2.5e-15 57.2 0.0 1 43 692 735 692 737 0.96
Sequence Information
- Coding Sequence
- ATGGTCAAAGCGTGCACTGTTACAGCATACAAAGATATAGCGCGTAACCTGTTCCGTAAACCTGTACCAGTGCGCCTGGGCTTGCTACGTACTGCCGAACAGTTGAAAATAAAGGGGCTTTGTGAGACGGCTGAAAACACAGACGATTTGAACGACGCAGCTACCGCTACTATCACAGTATCAGAGAATATACAACAAGCAGTTGTTGGTAACATTGTCAACACTACAGTAGCGCCAGGCCAAGCTTCTCCCAATACACAACATCAGCAACAACAACAGCAACAACAAATTGCAACGAATACGGCAGTGCTCACGCACAATATAGGTAACGTGACTACTGCCAATTCACAACCCATTGGATCTACGGTTACAAATACTGTTGGACAGTTAGTTACCGCAGGACCATCATCTCAACAACAAATAGGACGTAAATCTCGTGTTCGTAAGCGCTCAAAATCGCCGGATTTGCAACAGCAGGTACTCAATACTCAACAACAGGTCCAACAGCATCCGCAAACAATTTTAATTCAGAATCAAAATCAAGCTGCTATCGTTAGTTTACAACAGACCTCTTCTGGGAATTATATACCTGTATCCGGAGTTCAAACCGTCACCACCAGTGCAGCTGCGCAGCAGCAGACTGTAATCGCCAGTGACGAGTCAGACACGGATAAGCCGGCGTTGTCGAAAATCTGCAAGACAGAAACAGCGTCCGCGTCACCTGCATCCAGCGTATCCGGTGTATCGGGTTCAAATAATGCTGGAAGCGTAACCACTGTCGCAGCACCAGGCACAGCGATTGTTACGCAGATTGTAGTAGCTCGAGACGGCAAAGACAAAAATATGACTAGTTTAGGAATGGGAATGAACGGCGGAATTCTTGGCGTGCCAATGGGCTTTTTAGATTTTGCACCAGAACCACCAGCACCTTCGGCAACACCTGTAACAGTTACGGAACATGTTGATTTATCATGTAACCCCAATACCGACACCCGAGATTTATCAAACCCCACCGAAGCACTTGACATCGACAATCACTTGGCTCAACATATGATTCAACGGCTTGATCAATCTCCGATGCATGCGATCCACCATCAAACAGGCGATGAGAGTAATTCGAATTTAGTTCAGCATATTAAGAGTGAGGTGATTGACGCGAAACAGCAACAACAAGTACAGCAACAGCAACATCATCAGCCACAACAACATCAATTACATGCACAACAACTCACACAAACACAAGCACAGCAGCAGCAACACCAACAACAGCATCAAATACATCAACAACAAACTTCTCATTCTCATTCAACACACACCCAACAACAAGCACAATCACATCAGGACATATCCGGTGCAACAGTAATGGAAATCGATCCGAGCCAAATAAAACATGAACCTGGAATGATCATAACACCGGAAATAGTTAATATGATGACAACTGGACATATGGATATGTATAATTCAGATACAAGTGAGGATTCAATGATGATAGCAAATGGCTCACCTAACGATCAAAATGAGCCACACTATACGAATTTGGACCAACAACATGTGGATAGTAAAGGTCAGTTTAATGGTCCCAAAACTTGGACTCAAGATGATATGAATTCAGCTTTAGATGCGTTGAAGAATCAAAATATGAGCCTTACAAAGGCTTCAGTTACATATGGCATCCCATCTACAACTTTGTGGCAACGAGCCCATCGTATGGGCATCGAAACCCCAAAGAAGGAAGGTGGTACAAAATCATGGAATGAAGATTCTTTAAATAACGCTCTAGAGGCCCTTCGCTCTGGGCAAATATCAGCAAATAAAGCGTCTAAAGCCTTTGGTATACCTTCGTCGACGCTATACAAAATTGCGCGACGTGAGGGTATACGCTTAGCAGCTCCATTTAATGCGGCTCCAACAACGTGGACTCCGGAAGATTTGGAGCGAGCATTAGAGGCAATACGTGCTGGTCATACATCTGTTCAAAAAGCCAGTGCCGAATTTGGAATTCCGACAGGAACACTTTACGGCCGCTGCAAACGTGAAGGTATCGAATTGTCTCGTTCAAATCCAACACCTTGGTCAGAAGACGCAATGAATGAAGCTCTAAATTCAGTCCGTATTGGTCAGATGTCTATTAATCAGGCCGCGATTCACTACAACCTCCCCTATAGCTCTTTATATGGTCGCTTTAAACGAGGAAAATATGACGTGCCCAATACTAGTAGCACCTCCATAAATAACACATCAGGAAATACTTCGGGAAGCATCGAAATTATCGAGCATAGTCAAGAAAACTCGTTACATATGTTTCAGCAACAGTTCCAGTACAGTCCGTCGCCACATCAACAGCCGCAGCATAGTGGTCAAACTCAATCGCAGACGCCTCATTTAACTCAACATGTTGTACACATTCAGCAATCACAGACTCATCATCAGCAGCAAGTGCATGCTCAACAGCAACAACATATCCAACAACAAGATGTTGTAACATCTAGCAGCCAAGTGGCACATAGCAGTGCAGCGGCTGGGCAGCAGCAACAAATTCAACAGATCTATCATCATCACAGCACGCCGGAAAGAAGTTGA
- Protein Sequence
- MVKACTVTAYKDIARNLFRKPVPVRLGLLRTAEQLKIKGLCETAENTDDLNDAATATITVSENIQQAVVGNIVNTTVAPGQASPNTQHQQQQQQQQIATNTAVLTHNIGNVTTANSQPIGSTVTNTVGQLVTAGPSSQQQIGRKSRVRKRSKSPDLQQQVLNTQQQVQQHPQTILIQNQNQAAIVSLQQTSSGNYIPVSGVQTVTTSAAAQQQTVIASDESDTDKPALSKICKTETASASPASSVSGVSGSNNAGSVTTVAAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPNTDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHAIHHQTGDESNSNLVQHIKSEVIDAKQQQQVQQQQHHQPQQHQLHAQQLTQTQAQQQQHQQQHQIHQQQTSHSHSTHTQQQAQSHQDISGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSEDSMMIANGSPNDQNEPHYTNLDQQHVDSKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVPNTSSTSINNTSGNTSGSIEIIEHSQENSLHMFQQQFQYSPSPHQQPQHSGQTQSQTPHLTQHVVHIQQSQTHHQQQVHAQQQQHIQQQDVVTSSSQVAHSSAAAGQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00192007;
- 80% Identity
- iTF_00081116; iTF_00082048;