Bole011822.1
Basic Information
- Insect
- Bactrocera oleae
- Gene Symbol
- lolal
- Assembly
- GCA_001188975.4
- Location
- LGAM02006010.1:859605-905778[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.9 4.3e+03 -2.3 0.5 16 24 481 489 480 490 0.86 2 5 3.8e-11 8.7e-08 32.0 0.0 1 38 602 640 602 645 0.89 3 5 1.2e-13 2.7e-10 40.0 0.0 2 39 657 694 656 697 0.94 4 5 1.4e-17 3.2e-14 52.6 0.0 1 45 711 756 711 756 0.98 5 5 3.9e-19 9e-16 57.5 0.0 1 43 763 806 763 808 0.96
Sequence Information
- Coding Sequence
- ATGGCATCCAGAAGTCACCAGTATTTTAGTTTGCGTTGGAACAATTACCAAAACACCATGACTTCGGTGTTCCAGCAATTGCGCGAAGATTTATCCTTCGTGGATGTGACCCTTTCCTGTGAGCATGGCTCGCTAAAAGCACACAAggttGTTCTATCCGCCTGCTcatcatattttcaaaaactgctTTTGGAAAATCCCTGCAAACATCCCACCATCATACTTCCCGGCGATATTATATTCACGGACTTGAAGACcattattgattttgtttatcGTGGCGAAATTGATGTCACCGAATCTGAATTGCAGgGTTTATTACGTACAGCCGAACAGCTGAAAATTAAAGGACTTTGTGAGACGGCCGAAAACACAGACGATCTGAACGACTCAGCTACAGCTACAATCACAGTGTCGGAGAATATACAACAAGCCGTTGTTGGAAATATCGTTAATGCTACAGTAGCAACGGGTCAACTCTCACCCAATATACCACATCAAtcgcaacagcagcaacaacagatCGCTACTAATACAGCGGTGCTCACGCATAATATTGGCAACGTGACCACTGCTAATACACAACAAATTGGTTCAGCCACTACGAATGTCGCCGGACAGTTAGTTAGTGCAGGCACATCGGTACAACATCAACAGATTGGACGTAAATCTCGTGTACGTAAGCGTTCAAAATCTCCAGatatacaacaacaagtacagagtacacaacaaccacaaacaattttaatacaaaatcaaaatcagGCCGCTATCGTTAGTTTACAACAGACGTCGTCTGGTAATTATATACCGGTATCCGGTGTACAAACGGTAAGCACTAGCGGTGGTGGGCAACAACAGACGGTAATCACCGGTGACGATTCGGATACGGATAGGCCGTCGAAGATCTGTAAGACAGAAACAGCGTCAGCGTCACCTGCGTCCAGCGCATCTGGTGTATCGGGCACGAATAATGCTGGAAGCGTAACGACTGTTGCAGCACCAGGCACAGCGATTGTTACACAGATTGTAGTAGCACGAGACGGCAAAGATAAAAATATGACTAGTTTAGGAATGGGAATGaatggCGGAATTCTTGGAGTGCCAATGGGCTTTTTAGATTTTGCACCAGAACCACCAGCACCCTCAGCCACACCTGTAACAGTAACGGAGCATGTCGATTTATCATGTAATCCAAATACCGACACTCGAGATTTATCAAACCCCACCGAAGCACTGGACATCGACAATCATTTAGCCCAACACATGATTCAACGGCTTGATCAATCTCCGATGCATGCTATTCATCATCAGACAGGCGATGAAAGCAATTCGAATTTAGTTCAGCATATTAAGAGTGAGGTTATTGATgcgaaacagcaacaacaagtacagcaacagcaacatcatcaacagcaacaacatcaattGCATGCTCAACAACTCTCACAAAATCAagcacagcaacagcaacaccaacagcatcaagtacatcaacaacaaacagcacACTCACATTCAACACATGTCCAACAACAAGCACAATCACATCAGGACCTAACCGGAGCAACAGTAATGGAAATCGATCCAAGCCAAATAAAACATGAACCCGGAATGATCATAACACCGGAAATCGTTAATATGATGACAACTGGGCATATGGATATGTATAATTCTGATACAAGTGAAGATTCAATGATGATAGCAAATGGCTCACCAAACGATCAAACTGAGCCACATTATACTAATTTGGACCAACAACACGTGGATGGTAAAGGTCAGTTTAATGGTCCCAAAACTTGGACTCAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAATATGAGTCTTACAAAAGCATCAGTTACATATGGTATACCATCAACAACATTATGGCAACGTGCCCATCGTATGGGCATCGAAACGCCAAAGAAGGAGGGTGGTACGAAATCATGGAATGAAGATTCTTTAAATAATGCTTTAGAAGCCCTACGTTCTGGGCAAATATCAGCAAATAAAGCGTCCAAAGCCTTTGGTATACCATCCTCgacattatataaaattgcgcGACGCGAAGGTATACGCTTGGCGGCACCCTTTAATGCGGCACCCACAACGTGGACACCGGAAGATTTAGAGCGTGCTTTAGAAGCAATACGAGCTGGTCATACGTCCGTACAAAAGGCCAGCGCTGAATTTGGCATACCAACGGGCACCCTATACGGTCGTTGCAAGCGTGAAGGTATTGAGTTATCACGCTCGAATCCAACACCATGGTCGGAAGACGCAATGAACGAAGCTTTGAATTCGGTTcgCATCGGTCAGATGTCTATTAATCAGGCCGCAATTCACTATAACCTTCCCTATAGCTCTTTGTATGGTCGCTTTAAGCGTGGAAAGTATGACGTTACTAATACCAGTAGCACCTCCATTAATAATGCATCAGGAAACACTTCGGGAAGCATCGAAATTATCGAACATAGTCAAGAAAACTCGCAACAGTTCCAGTATAGTCCGTCTCCACATCAACAACCTCAACATGGCGGTCAAACTCAGTCGCAGACACCTCAACATTTAACCCAACATGTTGTACACATTCAGCAACCACAGACtcatcatcagcaacaacaagtacatgctcaacaacagcaacatatcCAGCAGCAGCAAGATGTTGTAACATCCAGCAGCCAGGTGGCACATAGCAGTGCAGCTGCtgggcagcaacaacagcagcaaattcAACAGATCTATCATCATCACAGCACGCCGGAAAGAAGTTGA
- Protein Sequence
- MASRSHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSSYFQKLLLENPCKHPTIILPGDIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENTDDLNDSATATITVSENIQQAVVGNIVNATVATGQLSPNIPHQSQQQQQQIATNTAVLTHNIGNVTTANTQQIGSATTNVAGQLVSAGTSVQHQQIGRKSRVRKRSKSPDIQQQVQSTQQPQTILIQNQNQAAIVSLQQTSSGNYIPVSGVQTVSTSGGGQQQTVITGDDSDTDRPSKICKTETASASPASSASGVSGTNNAGSVTTVAAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPNTDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHAIHHQTGDESNSNLVQHIKSEVIDAKQQQQVQQQQHHQQQQHQLHAQQLSQNQAQQQQHQQHQVHQQQTAHSHSTHVQQQAQSHQDLTGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSEDSMMIANGSPNDQTEPHYTNLDQQHVDGKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVTNTSSTSINNASGNTSGSIEIIEHSQENSQQFQYSPSPHQQPQHGGQTQSQTPQHLTQHVVHIQQPQTHHQQQQVHAQQQQHIQQQQDVVTSSSQVAHSSAAAGQQQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00192007;
- 80% Identity
- iTF_00192906;