Hdia025322.1
Basic Information
- Insect
- Hydrotaea diabolus
- Gene Symbol
- -
- Assembly
- GCA_963513945.1
- Location
- OY740720.1:63409635-63447468[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.8e-11 1.3e-07 32.0 0.0 1 38 555 593 555 598 0.89 2 4 2.1e-13 4.2e-10 40.0 0.0 2 39 610 647 609 650 0.94 3 4 3.6e-17 7.1e-14 52.1 0.0 1 45 664 709 664 709 0.97 4 4 2.5e-19 4.9e-16 59.0 0.0 1 45 716 761 716 761 0.97
Sequence Information
- Coding Sequence
- ATGAAGTTGTATGGAGAGAGGATGAAGAAGAATGGGTCAATGATGACACCACATCAAAAGGGTCTCTTGCGTACCGCTGAACAGTTAAAAATCAAAGGTCTCTGCGAAACAGCCGAAAACGCCGATGATCTAAACGATGCTGCCACAGCCACAATAACCGTATCCGAAAATATACAACAAGCCGTGGTCGGTAATATTGTCAATGCCACAGTAGTGCCCGGTCAAGCCTCGCCACCTATACCCcagcaacatcatcagcaacaacaacagcagcagcagcaacaacaacagcagcagcaacaccaacagcaacaacagcagcagcaacaacagttgACCAGTTCGGCTGTCCTCGCACATGCCGTCAGTCCCAATAGTGTCCAGCAATTGTCCGCAGCCGGACAATTGGTAACCTCCACACCCACCTCGTCCCAACCACCGCATCACCAGCAACTCGGTCGCAAGTCAAGAGTACGCAAACGTTCTAAATCGCCCGAAATCCTCTTGTCACATCACGAACAGGCccagcaacagcagcatccCCAAGCCATCCTCATACAGAATCAAAATCAGGCGGCCATTGTCAGTCTCCAACAGACATCGGCCGGTAATTATATACCTGTGTCGGGCGTTCAAACGGTCACGACCAGCGTAGCGGGTGGGCAGGCACAACAGCAGGGCGGCACGACTATAGTGACGACCGGCGACGATTCCGATTCGGAAAAGCCGACATtgcaaaaaatttgcaaaactgAAGCATCGGCAGCTTCGCCAGCGTCCGCATCATCGACATCGGCGTCAAATAATGCTGGAGGTGTAACTACGGTAGCAGCACCGGGAACAGCGATCGTAACACAAATTGTAGTAGCTAGAGACGGAAAAGATAAAAATATGACTAGTTTAGGCATGGGAATGaatgGTGGCATTCTGGGAGTCCCCATGGGCTTCTTGGATTTTGCACCAGAACCACCGGCACCATCAGCGACACCAGTTACGGTTACAGAACACGTGGATTTGTCATGTAACCCCAGCACGGATACAAGAGATCTATCAAATCCCTCAGAACCGCTCGATATCGACAATCATTTGGCCCAACACATGATACAACGGCTCGATCAATCTCCCATGCACTCCATGCACCATCAGACCGGTGACGAATCAAATTCAAATCTGGTCCAGCACATAAAAAGCGAAGTCATCGATGCCAAACAACACCAGCAGgcccagcagcagcaacaacagcagcaggcCGCTGCCGCCGCCCACCATCAAGCTCAACAGCAACAGCTGCATGCCCAGCAGCTGGCTGCGGCGCAGGGTCAAAGCCACCAGCAGCAGTCgcatcagcagcaacagcaatcgCATCAGCAACACCATCAGCAGGCCcaccagcaacagcagcatcatcagGAGATAACAGGGGCCACCGTAATGGAGATTGATCCGAGCCAAATAAAACATGAGCCGGGCATGATAATAACGCCGGAAATTGTAAATATGATGACCACCGGGCATATGGATATGTATAATTCCGATACGAGCGATGATTCAATGATGATTGCCAATGGCTCACCACATGATCAAAATGAACCGCACTATACCAATTTAGATCAGCAGCATGGTGGAGATATGAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAATATGAGTCTGACGAAAGCATCCGTTACCTATGGCATCCCCTCCACCACCCTATGGCAACGAGCCCATCGCATGGGCATCGAGACACCGAAGAAGGAAGGAGGCACCAAATCATGGAACGAAGACTCACTCAACAATGCTTTGGAAGCATTGCGCTCTGGACAAATATCAGCCAATAAAGCATCGAAAGCCTTTGGCATACCTTCATCGACGCTCTATAAGATAGCACGACGTGAGGGTATACGATTGGCAGCGCCTTTCAATGCCGCCCCAACCACCTGGTCCCCCGATGATCTGGAGCGTGCATTGGAGGCCATACGTGCGGGACATACATCCGTTCAGAAGGCAAGTGCTGAATTTGGCATACCAACAGGCACGCTGTACGGTCGTTGTAAACGTGAAGGCATTGAGCTGTCACGTTCAAATCCTACTCCATGGTCTGAAGATGCCATGAATGAAGCGTTGAATTCAGTGCGCATTGGCCAAATGTCTATCAATCAAGCTGCTATCCACTACAATTTACCCTATAGCTCGTTGTATGGCCGCTTCAAGCGTGGCAAATATGATGTGTCCAATGCCAGTGGTACTTCCATCAACAATACATCGGGCAACACATCGGGTAGCATTGAAATTATTGAGCATAGTCAAGAGAATTCGCAACAATTCCAATATAGTCCATCGCCGCATCAGCATGGCGGCAGTAGTACACCGCAACAAAGCCAAACACCGCAGCATCTACAGCAGCACGTAGTGCAcatacaacagcaacatcatcagcaacagCAGCCACAACAGCATGCGCAACATATCCAACAGCAGCAAGATGTTGTCACCTCATCCAGTCAACAAGTTCAACAACAGCACGCCAGCAATTCAGCCGCAGCGGCAGCTGCAtcacagcaacagcagcagcaacaacaacagcagcagcaacagcagcagattCAACAGATCTATCATCATCACAGTACACCCGAGAGAAGTTGA
- Protein Sequence
- MKLYGERMKKNGSMMTPHQKGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATVVPGQASPPIPQQHHQQQQQQQQQQQQQQQHQQQQQQQQQQLTSSAVLAHAVSPNSVQQLSAAGQLVTSTPTSSQPPHHQQLGRKSRVRKRSKSPEILLSHHEQAQQQQHPQAILIQNQNQAAIVSLQQTSAGNYIPVSGVQTVTTSVAGGQAQQQGGTTIVTTGDDSDSEKPTLQKICKTEASAASPASASSTSASNNAGGVTTVAAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPSEPLDIDNHLAQHMIQRLDQSPMHSMHHQTGDESNSNLVQHIKSEVIDAKQHQQAQQQQQQQQAAAAAHHQAQQQQLHAQQLAAAQGQSHQQQSHQQQQQSHQQHHQQAHQQQQHHQEITGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSDDSMMIANGSPHDQNEPHYTNLDQQHGGDMKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSPDDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVSNASGTSINNTSGNTSGSIEIIEHSQENSQQFQYSPSPHQHGGSSTPQQSQTPQHLQQHVVHIQQQHHQQQQPQQHAQHIQQQQDVVTSSSQQVQQQHASNSAAAAAASQQQQQQQQQQQQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_00679396;
- 80% Identity
- -