Bmin018419.1
Basic Information
- Insect
- Bactrocera minax
- Gene Symbol
- -
- Assembly
- None
- Location
- JAPVRH010008238.1:69446-74494[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2 4e+03 -2.1 0.5 16 24 379 387 378 388 0.86 2 5 4.1e-11 8.1e-08 32.1 0.0 1 38 500 538 500 543 0.89 3 5 1.3e-13 2.5e-10 40.2 0.0 2 39 555 592 554 595 0.94 4 5 1.5e-17 3e-14 52.7 0.0 1 45 609 654 609 654 0.98 5 5 4.2e-19 8.4e-16 57.7 0.0 1 43 661 704 661 706 0.96
Sequence Information
- Coding Sequence
- ATGTCGGGCTTGTTACGTACAGCAGAACAGCTGAAAATTAAAGGACTTTGTGAGACGGCTGAAAACACAGACGATCTGAACGATTCGGCCACAGCCACAATCACAGTATCGGAGAATATACAGCAAGCCGTTGTTGGTAATATCGTTAATGCTACGGTAGCAACAGGCCAACTCTCACCCAATATACCACATCAAtcgcaacagcagcaacaacagatCGCAACTAATACGGCGGTGCTCACGCATAATATTGGTAACGTGACAACCGCTAATGCACAACAAATTGGATCTGCCACTGCGAATATTGCAGGCCAATTAGTTAGTGCGGGCACATCGGTGCAACATCAACAAATTGGGCGTAAATCTCGTGTACGTAAGCGTTCAAAATCTCCagatatacaacaacaagtacagagtacacaacaaccacaaacaattttaatacaaaatcaaaatcaagcCGCTATTGTTAGTTTACAACAGACCTCGTCTGGTAATTATATACCGGTATCCGGTGTACAAACGGTAAGCACTAGCGGTGGTGGGCAACAGCAGACGGTAATCACCGGTGACGACTCGGATACGGATAGGCCGTCGAAGATCTGTAAGACAGAAACAGCATCAGCGTCACCTGCGTCCAGCGCATCTGGTATATCGGGCACGAATAATGCTGGAAGCGTAACAACTGTTGCAGCACCAGGCACAGCGATTGTTACGCAGATTGTAGTAGCACGAGACGgcaaagataaaaatatgacTAGTTTAGGAATGGGAATGaatggCGGAATTCTTGGAGTGCCAATGGGCTTTTTAGATTTTGCACCAGAACCACCAGCACCTTCAGCCACACCTGTAACAGTAACGGAGCATGTCGATTTATCATGTAATCCAAATACCGATACTCGAGATTTATCAAACCCCACCGAAGCACTGGACATCGACAATCATTTAGCCCAACACATGATTCAACGGCTTGATCAATCTCCGATGCATGCTATTCATCATCAAACTGGGGATGAAAGCAATTCGAATTTAGTTCAGCATATTAAGAGTGAGGTGATTGATgcgaaacagcaacaacaagtacagcaacaacaacatcaccaacagcaacaacatcaattGCATGCTCAACAACTCTCACAAAATCAagcacagcagcagcaacaccaacaacatcaagtacatcaacaacaaacagcacaCTCACATTCAACACACGTCCAACAACAAGCGCAATCACATCAGGACCTAACCGGAGCAACAGTAATGGAAATCGATCCAAGCCAAATAAAACATGAACCTGGAATGATTATAACACCGGAAATTGTTAATATGATGACAACTGGACATATGGATATGTATAATTCCGACACAAGTGAGGATTCAATGATGATAGCAAATGGTTCACCAAACGACCAAACTGAGCCACATTATACTAATTTGGACCAACAGCACGTGGATGGTAAAGGTCAGTTTAATGGTCCCAAAACTTGGACTCAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAATATGAGTCTTACAAAAGCATCAGTTACATATGGTATACCATCAACAACTTTATGGCAACGTGCTCATCGTATGGGCATAGAAACGCCAAAGAAGGAGGGTGGTACGAAATCATGGAATGAGGATTCTTTAAATAATGCTTTAGAAGCCCTACGTTCTGGGCAAATATCAGCAAATAAAGCGTCCAAAGCTTTTGGTATACCATCGTCgacattatataaaattgcgCGACGCGAAGGTATACGCTTAGCAGCACCTTTTAATGCGGCACCCACAACGTGGACACCAGAAGATTTAGAGCGTGCATTAGAAGCAATACGTGCTGGTCACACATCCGTACAAAAGGCCAGCGCTGAATTTGGCATACCAACGGGCACCCTATATGGTCGTTGCAAGCGCGAAGGTATTGAGTTGTCACGTTCGAATCCAACACCATGGTCGGAAGACGCAATGAATGAAGCTTTGAATTCAGTTCGGATTGGTCAGATGTCTATTAACCAGGCCGCAATTCACTACAACCTTCCCTATAGCTCTTTGTATGGTCGCTTTAAGCGTGGAAAGTATGACGTTACTAATACCAGTAGCACCTCCATTAATAATGCATCAGGAAACACTTCGGGAAGCATCGAAATTATCGAACATAGTCAAGAAAACTCGttacatatatttcagcAACAGTTCCAGTATAGTCCGTCTCCACATCAACAACCTCAGCATGGCGGTCAAACTCAATCTCAGACACCTCAACATTTAACTCAACATGTTGTACACATTCAGCAACCACAGACTCatcatcagcagcaacaagtACATgctcaacaacagcaacatatCCAGCAGCAACAAGATGTTGTAACATCTAGCAGCCAGGTAGCACATAGCAGCGCAGGTGCtgggcagcagcaacagcaacaaattcaaCAGATCTATCATCATCACAGCACGCCGGAAAGAAGTTGA
- Protein Sequence
- MSGLLRTAEQLKIKGLCETAENTDDLNDSATATITVSENIQQAVVGNIVNATVATGQLSPNIPHQSQQQQQQIATNTAVLTHNIGNVTTANAQQIGSATANIAGQLVSAGTSVQHQQIGRKSRVRKRSKSPDIQQQVQSTQQPQTILIQNQNQAAIVSLQQTSSGNYIPVSGVQTVSTSGGGQQQTVITGDDSDTDRPSKICKTETASASPASSASGISGTNNAGSVTTVAAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPNTDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHAIHHQTGDESNSNLVQHIKSEVIDAKQQQQVQQQQHHQQQQHQLHAQQLSQNQAQQQQHQQHQVHQQQTAHSHSTHVQQQAQSHQDLTGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSEDSMMIANGSPNDQTEPHYTNLDQQHVDGKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVTNTSSTSINNASGNTSGSIEIIEHSQENSLHIFQQQFQYSPSPHQQPQHGGQTQSQTPQHLTQHVVHIQQPQTHHQQQQVHAQQQQHIQQQQDVVTSSSQVAHSSAGAGQQQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979276;
- 90% Identity
- iTF_01563014; iTF_01562811; iTF_01563677; iTF_00189862; iTF_00193482; iTF_00193677; iTF_00191283; iTF_00191455; iTF_00192906; iTF_00192738; iTF_01045387; iTF_00091090; iTF_00082841; iTF_00081116; iTF_00082048; iTF_00303737; iTF_00303895; iTF_01189305; iTF_01357849; iTF_00992465; iTF_00190591; iTF_00190763;
- 80% Identity
- -