Gspa014168.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Globia sparganii
Gene Symbol
lrrfip2
Assembly
GCA_949316385.1
Location
OX438662.1:2522631-2534646[-]

Transcription Factor Domain

TF Family
LRRFIP
Domain
LRRFIP domain
PFAM
PF09738
TF Group
Unclassified Structure
Description
LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.047 9.1e+02 -0.0 0.1 48 91 58 102 38 107 0.76
2 3 1.9e-81 3.6e-77 260.7 24.4 1 297 122 411 122 413 0.90
3 3 2 3.8e+04 -5.8 16.2 1 48 410 456 410 484 0.72

Sequence Information

Coding Sequence
ATGGGACAGCGCTCCGAAGTGGTCACGCCTGACAATAGTGATGAGGAGAGCGGAGATGCCTTCACTGACGGAGATTTTGGTGATTCCGATGACGAGACGATCGTCGAACGCCTTGATGAAGCTAAGCCTGCTCATATACCGATCAATGAAGCTGTAAAAGATGATATTCTGAAGAGTGCTGCTACTAATGGTCACTCTAATGGTAGTGTAGATGAGCAGCCCAGAATTAATGGCCGTAAACATAGCGAAGCTCATTCAAGCGATATGGAAGACCACAGCTTAGTATTATCAGATTTGCGCCGTGATTCACACGGTGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAACAGAATCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCAGCGCGGGCTGAAGCGCGAGAAATACGCATGCGTGAGCTGGAGAGGCAGCAGCGCGAACAGGAGGACCATGCCGACAAGGCATACGATATGTATGCTGGCAAGACACCAGAGACGGTGGGTCGTCGAGGCACTACGAGGCTGACGGCGCTCAGCCCGGCCGTGCACTCACCGAGACGAAGCTCTGAAGACTCCGTCGATgatggcttcagcatcaaggaCCTTAGGCATGAGTTGAAGGAGGTGGAGGAGAAGTTCCGCAAAGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCTGCGCTTGGCTACCAGCTGGAGCTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAGTACGCGCAGCTGCAGCGGGAACACAGAGAAAAATGCTCATCATTCGAGCGTCTAAAGCGGGAGCACGAGTCCGTAACTCGCGAGCTGAGCGCGGCACGAGACGCCGTGCGAGCGCGAGACGCGGCGGCCGCGGGCGCGGGCTTCGCCTTCGTGGACGCCGCCGCGCTGGACGCGGCCGCGCGGGACTCGGCCGGCGCGCCCGTGGGCGCTGTGCCTGCGCTGGCGCTGGTCACGCAGCAGGCACACCAGCTGCTCAATGACGCCGGGGAGGGCACGCTCGACGTGCGGTTGCAAAAGCTGTTAACCTCGAAGCAGGCGCTAGAGTCAGAAGTACGCAAGTTGAAACTACAGCTGAATGAAGAACGCGCCGCCAGACAGAACGGAGTCACCAACCATCACGACCAAGAGTACGAGAATGAACTGGAGACAGTGCGCAAGGCGGTGTCGGAGGCGAAGGGCCGCGCGGCGCGCGCCGAGGCCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTGGAGGCGCAGCTGGCGCGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGGGAGGCTCGGGAAGCTCTCAATCGGGTTGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGACAAACTCAAGAACGCGAAGTCTGCACTCCTCAAAGACCTGTGA
Protein Sequence
MGQRSEVVTPDNSDEESGDAFTDGDFGDSDDETIVERLDEAKPAHIPINEAVKDDILKSAATNGHSNGSVDEQPRINGRKHSEAHSSDMEDHSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGTTRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVTRELSAARDAVRARDAAAAGAGFAFVDAAALDAAARDSAGAPVGAVPALALVTQQAHQLLNDAGEGTLDVRLQKLLTSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKAVSEAKGRAARAEAEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKHERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL