Asph006948.1
Basic Information
- Insect
- Asteroscopus sphinx
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_949699075.1
- Location
- OX453005.1:3851849-3876700[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.053 2.4e+03 -1.2 0.2 61 91 72 103 35 107 0.68 2 3 2e-79 9e-75 253.0 23.4 1 297 123 411 123 413 0.91 3 3 1 4.5e+04 -6.0 17.2 1 49 410 457 410 484 0.73
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCTGAAGTGGCAACACCTGACAATAGCGATGAGGAGAGTGGTGATGCCTTCACTGACGGAGATTTTTGCGATTCTGATGACGAAACCATCGTTGAACGCCATGACGAGGCTAAGGCTTCACACATACCCATCAATGAAACTGTGAATGAAGATATTCAGAAAAAAGGAGCTATAAACGGTCACTCTAATGGTGGCAGTGTAGAGGAGCAACCTAAAATTAATGGTCGTAAAAATAGTGAGAATCAATCAAGTGATGTAGAAACCCAAAGCTTAGTTTTATCGGATTTGCGCAGAGATTCACACGGCGATCAGAATCCTTCAATAGTGGGCATTCTCGGCGATCAGCAGAATCATGCAGAGCAGCGGTTGGCAGCGCGTCGGGCGGCGCGGGCAGAGGCGCGAGAGATACGCATGCGCGAGCTGGAGAGGCAGCAGCGCGAACAGGAGGACCATGCCGACAAGGCGTACGATATGTATGCGGTTAAAACACCAGAGACGGTGAGTCGTCGCCCGCGGCTGTCGGCGCTCAGCCCAGCTGTCGTACACTCGCCTCGCCGCAGCTCTGAGGATTCCATCGATGATGGCTTCAGCATCAAGGACCTCAGGCACGAGTTGAAGGAGGTGGAGGAGAAGTTCCGGAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTGGAGCTGCTCAAGGACCGGATAGAGGAGCTGCACGAGGAGTACGCACAGCTGCAGCGCGAGCACAAGGAGAAGTGCTCGTCGTTCGAGCGTCTGCGGCGCGAGCACGAGGCGGTGGCGCGCGAGCTGGGCGCGGCGCGGGACGCCGTGCGCGCGCGCGACGCGGCGGCGGCCGGCGCCGGCTTCGCCTTCGTGGACGCCGCGGCGCTGCAGCCCGCCGCGCGGGACGCCGCCGGCGCCGCAGTCGGCGCCGTGCCCGCGCTCGCGCTCGTCAGCCACACCGCCGAGCAGCTGCTCAACGACGCCGGGGAGGGCACGCTCGATGTGCGGTTGCAAAAGCTACTGGGTTCGAAGCAGGCGTTGGAGTCAGAGGTCCGTAAGCTGAAGCTGCAGCTGAACGAGGAACGCGCCGCCAGACAGAACGGCGTCACCAACCACCACGAACAAGAGTACGAGAACGAATTGGAGTCGGTGCGCAAGTCGGTGTCGGAGGCCAAGgggcgggcggcgcgcgcggAGGCGGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGCGCGGGAAGCACTCAACCGGGTAGAAGAGTTGGAGACTGAGAACAGCCATCTCACGAAACGACTAGACAAGCTCAAGAACGCAAAGTCCGCACTCCTGAAAGACCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFCDSDDETIVERHDEAKASHIPINETVNEDIQKKGAINGHSNGGSVEEQPKINGRKNSENQSSDVETQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAVKTPETVSRRPRLSALSPAVVHSPRRSSEDSIDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSFERLRREHEAVARELGAARDAVRARDAAAAGAGFAFVDAAALQPAARDAAGAAVGAVPALALVSHTAEQLLNDAGEGTLDVRLQKLLGSKQALESEVRKLKLQLNEERAARQNGVTNHHEQEYENELESVRKSVSEAKGRAARAEAEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -