Fyps021437.1
Basic Information
- Insect
- Fissipunctia ypsillon
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947568875.1
- Location
- OX387654.1:2954119-2965757[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.03 4.9e+02 0.6 0.5 44 92 54 103 36 107 0.77 2 3 8.7e-81 1.4e-76 258.5 24.1 1 297 122 411 122 414 0.90 3 3 2 3.2e+04 -6.2 13.4 1 153 410 459 410 484 0.51
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCCGAAGTGGCCACGCCTGACAATAGTGACGAGGAGAGTGGGGATGCCTTTACTGACGGAGATTTTGGTGATTCCGATGACGAGACGATCGTCGAACGCCTTGATGAAGCTAAGCCTGCTCACATCCCGATCAATGAAGCTGTTAAAGATGATATTCAGAAGACTGCGGCTACTAACGGTCACTCTAATGGTAGTGTAGATGAGCAGCCCAGAATGAATGGCCGTAAAAATAGTGAAGCTCATTCGAGTGATATGGAAAACCAAAGCTTAGTATTATCGGATATGCGCCGAGATTCACACGGCGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAGCAGAATCATGCGGAGCAGAGGTTAGCAGCGCGGCGAGCGGCGCGGGCTGAAGCGCGAGAAATACGCATGCGCGAGCTGGAGAGGCAGCAGCGCGAACAGGAGGACCATGCCGACAAGGCATACGATATGTACGCCGGCAAGACACCAGAGACGGTGGGTCGTCGCGGCGCTACGAGGCTGACGGCGCTCAGCCCGGCCGTGCACTCACCGAGACGAAGCTCTGAAGACTCCGTTGATGATGGTTTCAGCATCAAGGATCTTAGGCATGAGTTGAAGGAGGTAGAGGAGAAGTTCCGCAAGGCCATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTGGAACTGCTCAAGGACAGGATAGAGGAGCTGCAAGAGGAGTACGCGCAGCTGCAGCGCGAACATAGAGACAAGTGCTCATCATTCGAGCGTCTAAAGCGAGAACACGAGTCCGTAACTCGCGAGCTGAGCGCGGCACGAGATGCGGTGCGAGCGCGAGACGCGGCGGCGGCAGGCGCGGGCTTCGCCTTCGTGGACGCGGCGGCGCTAGACGTGGCAGCGCGGGACACTGCGGGCGCCGCGGTCGGGGCCGTGCCCGCGCTGGCGCTGGTCACGCACCAGGCTCACCAGCTGCTCAATGATGCTGGGGAGGGCACGCTTGACGTGCGGTTGCAAAAGCTGTTAACCTCGAAGCAGGCGCTGGAGTCGGAAGTACGCAAGTTAAAACTACAGCTGAATGAAGAGCGCGCCGCGAGACAGAACGGAGTCGCCAACCATCACGACCAGGAGTATGAGAATGAACTGGAAACAGTCCGCAAGGCGGTGTCGGAGGCGAAGGGGCGCGCGGCGCGGGCGGAGGCCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGTCTGGAGGCGCAGCTGGGGCGCCTGCGCGCGCGCCACGAGCTGCAGGATGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGCTCGAGAAGCACTCAATCGGGTTGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGACAAACTCAAGAACGCGAAGTCTGCGCTCCTCAAAGACCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERLDEAKPAHIPINEAVKDDIQKTAATNGHSNGSVDEQPRMNGRKNSEAHSSDMENQSLVLSDMRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHRDKCSSFERLKREHESVTRELSAARDAVRARDAAAAGAGFAFVDAAALDVAARDTAGAAVGAVPALALVTHQAHQLLNDAGEGTLDVRLQKLLTSKQALESEVRKLKLQLNEERAARQNGVANHHDQEYENELETVRKAVSEAKGRAARAEAEAALQAAHVARLEAQLGRLRARHELQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -