Amun007546.1
Basic Information
- Insect
- Anorthoa munda
- Gene Symbol
- lrrfip2
- Assembly
- GCA_945859655.1
- Location
- CAMAOM010000110.1:823449-839620[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.094 6.3e+02 0.6 0.4 43 91 53 102 35 107 0.77 2 3 1.7e-80 1.2e-76 259.1 23.4 1 270 122 390 122 409 0.88 3 3 2.4 1.6e+04 -4.1 13.3 1 39 410 448 410 456 0.87
Sequence Information
- Coding Sequence
- ATGGGGCAGCGCTCCGAAGTGGCCACGCCTGACAATAGTGACGAGGAAAGCGGGGATGCCTTCACTGATGGAGATTTCGGTGATTCTGATGAGGAAACCATCGTCGAACGCCTTGATGAAGCCAAGCCTGCTCACATGCCCGTCAATGAAGCTGTCAAAGATGATATTCAGAAGAGTGCAGCTACTAATGGTCACACTAATGGCAGTGTAGAGGAACTGCCCAAAATGAATGGCCGCAAAAATAGTGAAGCTCATTCGAGTGATACGGAAAACCAAAGCTTAGTATTATCGGATTTGCGCCGAGATTCCCATGGCGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAGCAGAACCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCGGCGCGGGCAGAGGCGCGAGAGATACGCATGCGCGAGCTTGAGAGACAGCAGCGCGAACAGGAGGACCATGCGGACAAGGCATATGACATGTATGCCGGCAAGACACCAGAGACGGTGGGCCGTCGCGGCGCCACGAGGCTGACGGCGCTCAGCCCAGCCGTGCACTCTCCGAGACGGAGCTCGGAGGATTCCGTCGATGATGGATTCAGCATTAAAGACCTTAGGCACGAGCTCAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGATCGAGCTGCTCAAGGACCGGATAGAGGAGCTGCACGAAGAGTACGCGCAGTTGCAGCGCGAACACAGAGAAAAATGCTCATCATTCGAGCGTCTAAAGCGCGAGCACGAGTCTGTAACTCGCGAGCTGAGCGCGGCACGAGATGCGGTACGGGCACGAGACGCTGCGGCGGCGGGGGCGGGCTTCGCGTTCGTGGACGCGGCGGCGCTGGATGCGGCGGCGCGGGACACTGCGGGGGCGGCCGTGGGCGCTGTGCCGGCGCTGGCGCTGGTCACGCACCAGGCGCATCAGCTGCTCAACGATGCTGGGGAGGGCACACTGGACGTGCGGTTGCAAAAGCTGTTGAGTTCGAAACAAGCGCTAGAGTCAGAAGTCCGCAAGCTCAAGCTGCAGCTCAACGAGGAGCGCGCCGCCAGGCAGAACGGAGTCGCCAACCATCACGACCAGGACTACGAGAACGAACTGGAAACAGTGCGCAAGTCGGTGTCGGAGGCGAAGGGGCGCGCAGCCCGCGCGGAGGCGGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGCGGCTGCGCGCGCGGCAGGAGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCAAGCTGCAGAGAGAGGTACAACGATAG
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDEETIVERLDEAKPAHMPVNEAVKDDIQKSAATNGHTNGSVEELPKMNGRKNSEAHSSDTENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQIELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVTRELSAARDAVRARDAAAAGAGFAFVDAAALDAAARDTAGAAVGAVPALALVTHQAHQLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVANHHDQDYENELETVRKSVSEAKGRAARAEAEAALQAAHVARLEAQLARLRARQEHQDEHEEQLKHERRKLQREVQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -