Alit021134.1
Basic Information
- Insect
- Agrochola litura
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949152395.1
- Location
- OX424502.1:22428418-22443425[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.014 7.1e+02 0.7 0.9 43 91 53 103 35 108 0.75 2 3 2.7e-81 1.3e-76 259.2 22.8 1 296 123 411 123 414 0.89 3 3 1 5e+04 -6.6 15.4 1 49 411 458 411 484 0.66
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCCGAAGTGGCCACGCCTGACAATAGCGATGAGGAGAGCGGGGACGCCTTCACTGACGGAGATTTTGGTGATTCCGATGATGAGACGATCGTTGAACGCCTTGATGAAGCTAAGCCTGCTCACATACCGATCAATGAAGCTGTGAAAGATGATGTTCAGAAGAGTGCGGCTACTAATGGTCACTCTAATGGTAGTGTAGATGAGCAGTCAAGAATGAATGGCCGTAAAAATAGTGATGAAGCTCATTCAAGTGATATGGAAAACCAAAGCTTAGTATTATCGGATTTGCGCCGAGATTCACACGGCGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAGCAGAATCATGCGGAGCAAAGGTTAGCGGCGCGGCGAGCGGCGCGGGCTGAAGCGCGAGAAATACGCATGCGTGAGCTGGAGAGGCAGCAGCGCGAACAGGAAGACCATGCGGACAAGGCGTACGATATGTATTCCGGAAAGACACCAGAAGCGGTGGGTCGTCGCGGCGCTACGAGACTGACGGCGCTCAGCCCGGCCGTACACTCACCGAGACGAAGCTCTGAAGACTCCGTCGATGATGGCTTCAGCATCAAGGATCTTAGGCATGAGTTGAAGGAGGTGGAGGAGAAGTTCCGTAAGGCGATGATCCTGAACGCGCAGCTGGACAACGATAAGGCGGCGCTCGGCTACCAGCTGGAGCTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAGTATGCGCAGCTGCAGCGTGAACACAGAGAAAAGTGCTCATCATTCGAACGTCTAAAGCGAGAACACGAGTCGGTAACTCGCGAGCTGAGTGCGGCACGAGACGCGGTGCGAGCGCGagacgcggcggcggcgggcgccgGCTTCGCCTTCGTCGACGCCGCCGCGCTGGACGCCGCCGCGCGCGGCACTGCGGGCGCCGCCGTCGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCACCAGGCGCACCAGCTGCTGCACGATGCTGGGGAGGGCACGCTTGACGTGCGGTTGCAAAAGCTGTTAACCTCGAAGCAGGCGCTGGAGTCGGAAGTACGCAAGCTGAAACTACAGCTGAATGAAGAGCGCGCCGCGAGACAGAACGGAGTCACCAACCATCACGACCAAGAGTACGAGAATGAACTGGAGACAGTCCGCAAGGCGGTGGCGGAGGCGAAGGGTCGCGCGGCGCGTGCCGAGGCCGACGCGGCGCTGCAGGCGGCGCACGTGGCGCGTCTGGAGGCGCAGCTCGCGAGGCTGCGCGCGCGCCAGGACCATCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGCTCGGGAAGCTCTCAATCGGGTTGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGACAAACTCAAGAACGCTAAGTCTGCACTCCTGAAAGATCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERLDEAKPAHIPINEAVKDDVQKSAATNGHSNGSVDEQSRMNGRKNSDEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYSGKTPEAVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVTRELSAARDAVRARDAAAAGAGFAFVDAAALDAAARGTAGAAVGAVPALALVTHQAHQLLHDAGEGTLDVRLQKLLTSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKAVAEAKGRAARAEADAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -