Ddah012358.1
Basic Information
- Insect
- Diarsia dahlii
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949775195.1
- Location
- OX459195.1:2546282-2556662[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.011 5.5e+02 1.0 0.3 43 91 53 102 35 107 0.78 2 2 3.2e-81 1.5e-76 259.0 21.8 1 269 122 389 122 400 0.90
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCTGAAGTGGCCACACCTGACAATAGTGATGAAGAGAGCGGGGATGCCTTCACTGACGGTGATTTTGGTGATTCCGATGATGAAACCCTCGTCGAACGTCCTGATGAAGCAAAGCCGGCTCACATGCCGATCAATGAAGCTGTAAAAGATGATATTCAGAAGAATGCTGCTACTAATGGGCACACAAATGGCAGTGTAGATGAGCAGCCCAGAATGAATGGCCGAAAGAATAGTGAAGCTCATTCGAGTGATATGGAAAACCAAAGCTTAGTATTATCGGATTTGCGCCGAGATTCACACGGCGATCAGAATCCCTCAATCGTTGGCATTCTCGGCGATCAGCAGAACCATGCGGAGCAGAGGTTAGCagcgcgacgagcggcgcgggCTGAAGCCAGGGAGATACGGATGCGTGAGCTGGAGAGACAGCAGCGCGAACAAGAGGACCATGCCGACAAGGCGTACGACATGTATGCGGGAAAGACTCCAGAGACGGTGGGTCGTCGCGGCGCTACGAGGCTGACGGCACTGAGCCCGGCCGTGCACTCGCCCAGACGGAGTTCTGAAGACTCCATCGATGATGGCTTCAGCATCAAGGACCTAAGGCACGAGTTGAAGGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTGGAACTGCTCAAGGACCGGATAGAGGAGTTGCACGAAGAGTACGCACAGTTGCAGCGCGAGCACAGAGAGAAATGCTCATCATTCGAGCGTCTAAAGCGTGAACACGAGTCTGTGTCACGTGAGCTGAGCGCGGCGCGGGACGCCGTGCGCGCGCGGGACGCGGCGGCCGCCACAGCCGGGTTCGCCTTCGTGGACGCCGCCGCGCTGGAGCCCGCCCGCAGGGACGCGGCGGGGGCTGCGGTCGGCGCCGTGCCCTCGCTGGCGCTCGTGACGCACCAGGCGCAGCAGCTGCTCGATGATGCGGGAGAGGGCACGCTTGACGTGCGGTTGCAAAAGCTGCTGAGCTCGAAGCAGGCGCTGGAGTCCGAGGTGCGCAAACTGAAGCTACAGCTCAACGAGGAACGCGCCGCCAGGCAGAACGGAGTCACCAACCATCACGACCAGGACTACGAGAATGAACGTGAGTCTACTTACActgggcagacgacattgtcGCCTTCGCGGGAATACCCTGAATGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETLVERPDEAKPAHMPINEAVKDDIQKNAATNGHTNGSVDEQPRMNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSIDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVSRELSAARDAVRARDAAAATAGFAFVDAAALEPARRDAAGAAVGAVPSLALVTHQAQQLLDDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVTNHHDQDYENERESTYTGQTTLSPSREYPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -