Lwla017192.1
Basic Information
- Insect
- Lacanobia wlatinum
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_947578705.1
- Location
- OX388034.1:25108692-25130992[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.02 5.8e+02 0.2 0.5 43 91 53 102 34 107 0.77 2 3 2.2e-81 6.3e-77 259.5 23.6 1 297 122 411 122 413 0.90 3 3 1 2.9e+04 -5.5 16.6 1 49 410 457 410 483 0.73
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCCGAAGTGGCCACGCCTGACAATAGTGACGAGGAGAGCGGAGACGCCTTCACTGACGGAGATTTCGGTGATTCTGATGACGAAACGCTCATCGAACGCGCTGATGAAGCTAAGCCTGCTCACATACCGATTAATGAAGCTGTCAAAGATGATATTCAGAAGAGTGCTGCTACTAATGGTCACTCTAACAGTAGTTTAGATGAGCAGCCCAGATTGAATGGCCGAAAGAATAGTGAAGCTCATTCGAGTGATATGGAAAACCAAAGCCTAGTATTATCGGATTTGCGCCGAGACTCACACGGCGATCAGAATCCTTCAATTGTGGGCATTCTCGGCGATCAGCAGAACCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCGGCGCGGGCCGAGGCGCGAGAGATACGCATGCGCGAGCTGGAGAGGCAGCAGCGTGAGCAGGAGGACCATGCGGACAAGGCGTACGATATGTACGCCGTGAAGACACCAGAGACGGTCGGGCGTCGCGGCGCCACGCGGCTGACGGCGCTGAGCCCGGCCGTGCACTCCCCGAGGCGAAGCTCTGAAGACTCCGTCGACGATGGCTTCAGCATCAAGGACCTTAGGCACGAGTTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTGGAGCTGCTGAAGGACAGGATAGAAGAGCTGCACGAGGAGTACGCGCAGCTGCAGCGCGAACACAGAGAAAAGTGCTCATCATTCGAGCGCCTAAAGCGCGAACACGAGTCCGTGTCGCGCGAGCTGAGCTGTGCGCGGGACGCCGTACGCGCGCGGGATGCTGCCGCCGCCGGCGCCGGCTTCGTCTTCGTGGACGCCGCGCAGCTGGAGCCCGGCGCCCGGGACGCTGCGGGGGCTGCGGTGGGCGCCGTGCCCGCGCTGGCGCTCGTGACCCATCAGGCGCACCAGCTGCTCAATGATGCGGGGGAGGGCACGCTCGACGTACGGTTGCAAAAGCTGCTGAGCTCGAAGCAGGCGCTAGAATCCGAAGTCCGCAAACTGAAGCTGCAGCTCAACGAGGAGCGAGCCGCGCGGCAGAACGGAGTCACCAACCACCACGACCAGGAGTACGAGAATGAACTGGAAACAGTTCGTAAGGCGGTGTCGGAGGCGAAGGGGCGCGCAGCTCGCGCGGAGGCGGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGGGAGGCTCGGGAAGCTCTCAACCGGGTTGAAGAGTTGGAGACGGAGAACAGCCACCTCACGAAACGACTCGACAAGCTCAAGAACGCCAAGTCTGCGCTCCTCAAAGACCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETLIERADEAKPAHIPINEAVKDDIQKSAATNGHSNSSLDEQPRLNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAVKTPETVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVSRELSCARDAVRARDAAAAGAGFVFVDAAQLEPGARDAAGAAVGAVPALALVTHQAHQLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKAVSEAKGRAARAEAEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -