Dlab013426.1
Basic Information
- Insect
- Dryobota labecula
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947523025.1
- Location
- OX383292.1:24311749-24323770[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.059 1.7e+03 -1.3 0.1 45 91 55 102 38 106 0.72 2 3 6.8e-81 1.9e-76 257.9 23.3 1 295 122 409 122 414 0.88 3 3 1 2.8e+04 -9.1 15.0 1 47 410 455 408 476 0.60
Sequence Information
- Coding Sequence
- ATGGGACAACGCTCCGAAGTGGCCACTCCTGACAATAGTGATGAGGAGAGCGGGGACGCCTTCACTGACGGAGATTTTGGTGATTCCGATGATGAGACGATCGTTGAACGCCTTGATGAAGCTAAGCCTGCTCAGATACCTATCAATGAAGCTGTAAAAGATGATATTCAGAAGAGTGCGGCTACTAATGGTCCCTCTAATGGTAGTGTAGATGAGCAGCCCAGAATCAATGGCCGTAAAAATAGTGAAGCTCATTCGAGTGATATGGAAAACCAAGGCTTAGTATTATCGGATTTGCGCCGTGATTCACACGGTGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAGCAGAATCATGCGGAGCAGAGGTTAGCAGCGCGGCGAGCGGCGCGGGCTGAAGCGCGAGAAATACGCATGCGCGAGCTGGAGAGGCAGCAGCGCGAACAGGAGGACCATGCCGACAAGGCCTACGATATGTACGCCGGCAAGACACCAGAGCCGGTGGGTCGTCGCGGCGCTACGAGACTGACGGCGCTCAGCCCGGCCGTGCACTCACCGAGACGAAGCTCTGAAGATTCCGTTGATGATGGGTTCAGCATCAAGGATCTTAGGCACGAGTTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAATGACAAGGCGGCGCTTGGCTACCAGCTGGAGCTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAGTACGCCCAGCTGCAGCGCGAACACAGAGAAAAATGCTCATCATTCGAGCGTCTAAAGCGAGAACACGAGTCTGTAACTCGCGAGCTGAGCGCGGCTCGAGACGCGGTCCGAGCGCGAGACGCGGCGGCTGCGGGCGCGGGCTTCGCCTTCGTGGACGCAGCGGCGCTGGATGCGGAGGCGCGCGACACCGCGGGGGCCGCGGTCGGGGCCGTGCCCGCGCTGGCGCTGGTCACGCACCAGGCACATCAGCTGCTCAACGACGCTGGGGAGGGCACGCTAGACGTGCGGTTGCAAAAGCTGTTAACCTCTAAGCAGTCGCTCGAGTCAGAAGTACGCAAGTTGAAACTACAGCTGAACGACGAACGCGCTGCGAGACAGAATGGAGTCACTAACCATCACGACCAAGAGTACGAGAACGAACTGGAAACCGTCCGCAAGGCGGCGTCGGAGGCGAAGGGCCGCGCGGCGCGCGCCGAGGCCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTGGCGCGGCTGCGCGCGAGGCAGCAGCTGCAGGACGCCCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGGGAGGCTCGGGAAGCACTCAATCGAGTTGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGACAAACTCAAGAACGCGAAGTCTGCACTCCTCAAAGATCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERLDEAKPAQIPINEAVKDDIQKSAATNGPSNGSVDEQPRINGRKNSEAHSSDMENQGLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPEPVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVTRELSAARDAVRARDAAAAGAGFAFVDAAALDAEARDTAGAAVGAVPALALVTHQAHQLLNDAGEGTLDVRLQKLLTSKQSLESEVRKLKLQLNDERAARQNGVTNHHDQEYENELETVRKAASEAKGRAARAEAEAALQAAHVARLEAQLARLRARQQLQDAHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -