Basic Information

Insect: Sesamia inferens
Gene Symbol: lrrfip2
Assembly: GCA_037179545.1
Location: CM073931.1:30196044-30209590[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.12 3.5e+03 -1.4 0.4 48 91 54 98 32 102 0.69

2 3 2.2e-80 6.4e-76 257.2 23.8 1 297 118 407 118 409 0.89

3 3 2 5.7e+04 -8.4 15.3 1 48 406 452 406 480 0.64

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.12	3.5e+03	-1.4	0.4	48	91	54	98	32	102	0.69
2	3	2.2e-80	6.4e-76	257.2	23.8	1	297	118	407	118	409	0.89
3	3	2	5.7e+04	-8.4	15.3	1	48	406	452	406	480	0.64

Sequence Information

Coding Sequence: ATGGGACAGCGCTCCGAAGTAGCCACGCCTGACAATAGTGACGAGGAGAGCGGGGACGCCTTTACTGACGGAGATTTTGGTGATTCCGATGAAGAAACGATCGTCGAACGCCTTGATGAAGCTAAGCCTTCTCACATACCGGTCAATGAAGCTGTAAAAGATGATATTCAGAAGAGTGCGACTACTAATGGTAGCGTAGATGAGCAGATCAGAATAAATGGCCGTAAAAATAGTGAAGCTCATTCAAGTGATATAGAAAGCCAAAGCTTAGTGTTATCCGATTTACGCCGAGATTCACACGGCGACCAGAATCCTTCAATCGTTGGCATTCTCGGAGATCAGCAGAATCATGCAGAGCAGAGGTTAGCAGCGCGACGAGCAGCGCGGGCTGAAGCTCGAGAAATACGCATGCGTGAGCTGGAGAGACAGCAGCGCGAACAGGAAGACCATGCCGACAAGGCGTACGATATGTATGCTGGCAAAACACCAGAGGTGGTGGGTCGTCGCGGAGCCTCGAGGCTGACGGCGCTCAGCCCGGCCGTGCACTCACCGAGACGAAGCTCTGAAGATTCCGTTGATGATGGCTTCAGCATCAAGGACCTTAGGCATGAGTTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAACTGGACAACGACAAGGCCGCGCTCGGCTACCAGCTGGAGTTGCTTAAGGACAGGATAGAGGAGCTTCACGAGGAGTACGCGCAGCTGCAGCGCGAACACAGAGAAAAATGCTCATCATTCGAGCGTTTAAAGCGGGAACATGAGTCAGTAACGCGAGAGCTGAGCGCGGCGCGAGACGCCATCCGAGCGCGGGACGCGGCGGCCGAGGGCGCGGGCTTCGCCTTCGTGGACGCCGCGGCACTGGACGCGCCCGACCGGGGCCGCGCCGGCACCTCCGTCGGCGTCGTCCCCGCGCTGGCGCTGGTCACGCAGCAGGCACAGCAGCTGCTCAACGACGCCGGGGAGGGCACGCTCGATGTGCGGTTGCAAAATCTATTATCCTCGAAGCAGGCGTTGGAGTCAGAAGTACGTAAGTTGAAGCTACAACTGAATGAAGAACGCGCCGCCAGACAGAACGGAGTCGCCAACCATCACGACCAAGAGTATGAAAACGAACTGGAGACAGTGCGCAAGGCGGTGGCGGAGGCGAAAGGCCGGGCGGCGCGCGCTGAGGCAGAGGCAGCACTACAGGCCGCACATGTCGCACGACTTGAAGCACAACTAGCACGGAGCCGCGCCCGCCAGGGCCATCAGGACGAGCATGAGGAGCAGCTCAAGCAGGAGCGGCGCCGGCTGCAGCGGGAGGCTCGGGAAGCGCTTAATCGAGTTGAAGAGTTGGAAACTGAGAACAGCCACCTCACGAAACGACTCGACAAACTCAAGAACGCGAAGTCCGCACTCCTCAAAGACCTGTGA
Protein Sequence: MGQRSEVATPDNSDEESGDAFTDGDFGDSDEETIVERLDEAKPSHIPVNEAVKDDIQKSATTNGSVDEQIRINGRKNSEAHSSDIESQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPEVVGRRGASRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVTRELSAARDAIRARDAAAEGAGFAFVDAAALDAPDRGRAGTSVGVVPALALVTQQAQQLLNDAGEGTLDVRLQNLLSSKQALESEVRKLKLQLNEERAARQNGVANHHDQEYENELETVRKAVAEAKGRAARAEAEAALQAAHVARLEAQLARSRARQGHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00907905;
90% Identity: iTF_00745719;
80% Identity: -