Hdys013419.1
Basic Information
- Insect
- Hecatera dysodea
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_905332915.1
- Location
- HG995296.1:19782667-19796545[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.026 9.9e+02 -0.1 0.5 43 90 53 102 36 107 0.70 2 3 2.6e-81 1e-76 259.2 24.0 1 297 123 408 123 410 0.90 3 3 1 3.8e+04 -5.4 16.6 1 49 407 454 407 481 0.73
Sequence Information
- Coding Sequence
- ATGGGACAACGCTCCGAAGTGGCCACACCTGATAATAGTGACGAGGAGAGCGGAGACGCCTTCACTGACGGAGATTTCGGTGATTCTGATGACGAGACGATCGTCGAACGCCCTGACGAAGCTAAGCCTGCTCACATGCCGATAAATGAAGCTGTAAAAGATGATATCCAGAAGAGTGCTGCTACTAATGGTCACTCTAACGGCAGTTTAGATGAGCAGCCCAGAATGAATGGCCGAAAGAATAGTGAAGCTCATTCGAGTGATATGGAAAACCAAAGCAGCTTAGTACTGTCAGATTTGCGCCGAGACTCACACGGCGACCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAGCAGAACCATGCGGAGCAGAGATTAGCAGCGCGGCGAGCGGCGCGCGCCGAGGCTCGGGAGATACGCATGCGTGAGCTGGAGAGGCAGCAGCGCGAGCAGGAGGACCATGCAGACAAGGCGTACGATATGTACGCTGGCAAGACACCAGAGACAGTGGGTCGTCGCGGCGCCACGAGGCTGACGGCGCTCAGTCCAGCCGTTCATTCCCCGAGGCGAAGCTCTGAAGACTCCGTCGATGATGGCTTCAGCATCAAGGACCTTCGACACGAGTTGAAGGAGGTGGAAGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTGGAGCTGCTGAAGGACAGGATAGAGGAGCTGCATGAGGAGTACGCGCAGCTGCAGCGTGAACACAGAGAAAAATGTTCATCGTTCGAGCGTCTAAAGCGCGAGCATGAGTCAGTATCGCGCGAGCTGAGCGCGGCGCGACTGGCCGTGCGCGCGCGCGACGCGGCCGCCGAGAGCGCCGGCTTCGCCTTCGTGGACGCCGCGCAGCTGCCGCCCGCCCCGGCCGACGCGCTGCCCGCGCTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGTCCGATGCGGGCGAGGGCACGCTCGACGTACGGTTGCAAAAGCTGCTGAGCTCGAAGCAAGCGCTAGAATCCGAAGTCCGCAAGCTGAAGCTGCAGCTCAACGAGGAGCGCGCCGCCAGGCAGAACGGAGTCGCCAACCACCACGACCAGGACTACGAGAATGAACTAGAGACGGTGCGCAAGTCGGTGTCGGAGGCGAaggcgcgcgcggcgcgggcggaGGCGGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTGGAGGCGCAGCTGGCCCGTCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGGGAGGCTCGGGAAGCTCTCAATCGGGTTGAAGAGTTGGAGACGGAGAACAGTCACCTCACGAAGCGACTCGACAAGCTCAAGAACGCCAAGTCTGCGCTCCTCAAAGACCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERPDEAKPAHMPINEAVKDDIQKSAATNGHSNGSLDEQPRMNGRKNSEAHSSDMENQSSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVSRELSAARLAVRARDAAAESAGFAFVDAAQLPPAPADALPALPALALVTQQAQQLLSDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVANHHDQDYENELETVRKSVSEAKARAARAEAEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -