Hrec011558.1
Basic Information
- Insect
- Hyppa rectilinea
- Gene Symbol
- lrrfip2
- Assembly
- GCA_951799385.1
- Location
- OX637308.1:18046398-18059426[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.086 1.5e+03 -0.9 0.4 45 91 55 102 35 106 0.69 2 3 2.3e-80 4.1e-76 257.1 24.1 1 271 122 391 122 412 0.88 3 3 2 3.6e+04 -9.8 15.0 1 43 410 452 410 477 0.52
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCCGAAGTGGCTACGCCTGACAATAGTGACGAGGAGAGCGGAGACGCATTCACAGACGGAGATTTTGGCGATTCCGATGACGAAACGATTGTCGAACGCCTTGATGAAGCTAAGTCTGCTCACATACCAGTCAATGAAGCTGTAAATGATGACATTCAGAAGAGTGCAGCTACTAACGGTCACTGTAATGGTAGTGTAGATGAGCAGCCAAGAATGAATGGTCGTAAAAATAGTGAAGCTCATTCAAGTGATATGGAAAACCAAAGCTTAGTATTATCGGATTTGCGCCGAGACTCACACGGCGATCAGAATCCTTCAATTGTTGGCATTCTCGGCGATCAGCAGAACCATGCGGAGCAAAGGCTAGCAGCGCgacgggcggcgcgggcggagGCGCGAGAGATACGCATGCGAGAACTGGAGAGGCAGCAGCGTGAACAGGAGGACCATGCCGACAAGGCCTACGACATGTATGCCGGCAAGACACCAGAGTCGGTGGGTCGTCGCGGCGCTACGAGGCTGACAGCGCTCAGCCCGGCCGTGCACTCACCGAGAAGAAGCTCTGAAGACTCCGTTGATGATGGTTTCAGCATCAAGGACCTTAGGCACGAGTTGAAGGAGGTGGAGGAGAAGTTCCGTAAGGCGATGATCCTGAACGCGCAGCTGGATAACGACAAGGCGGCGCTCGGCTACCAGCTGGAGCTGCTCAAGGACAGGATAGAAGAGCTTCACGAAGAGTATGCGCAGCTGCAGCGCGAACACAGAGAAAAATGCTCATCATTCGAGCGTCTAAAGCGGGAACACGAGTCCGTAACTCGTGAGCTGAGTGCGGCACGAGACGCGGTACGAGCACGAgacgcggcggcggcgggcgcgggcttCGCCTTCGTTGACGCCGCGGCGCTCGACGCGGAGGCACGCGACACTGCGGGCGCCCCCGTGGGGGCCGTGCCCGCGCTGGCGCTGGTCACGCACCAGGCGCACCAGCTGCTGCGGGATGCTGGGGAGGGCACGCTGGACGTGCGGTTGCAAAAGCTGTTAACTTCGAAGCAGGCGCTAGAGTCGGAGGTGCGCAAGTTGAAACTACAGCTGAACGAAGAGCGCGCCGCAAGACAGAACGGAGTCACCAACCATCACGACCAAGAGTATGAGAATGAACTGGAATCGGTCCGCAAGTCGTCGTCCGAGGCGAAGGGCCGCGCGGCGCGCGCCGAGGCGGAGGCGGCGCTGCAGGCCGCGCACGTGGCGCGCCTGGAGGCCCAGCTGGCGCGCCTGCGGGCCCGCCAGGAGCTGCAGGACGGCCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGTCTGCAGCGGGAGGCTCGGGAAGCACTCAATCGGGTTGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGGCTCGACAAACTCAAGAACGCGAAGTCTGCACTCCTGAAAGACCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERLDEAKSAHIPVNEAVNDDIQKSAATNGHCNGSVDEQPRMNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPESVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVTRELSAARDAVRARDAAAAGAGFAFVDAAALDAEARDTAGAPVGAVPALALVTHQAHQLLRDAGEGTLDVRLQKLLTSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELESVRKSSSEAKGRAARAEAEAALQAAHVARLEAQLARLRARQELQDGHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -