Oleu011278.1
Basic Information
- Insect
- Ochropleura leucogaster
- Gene Symbol
- lrrfip2
- Assembly
- GCA_958449745.1
- Location
- OY288211.1:2026460-2037663[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.019 5.8e+02 0.3 0.4 45 91 55 102 36 107 0.71 2 3 9.6e-81 2.9e-76 257.4 24.0 1 297 122 402 122 404 0.91 3 3 1 3e+04 -5.7 17.7 1 49 401 448 401 474 0.73
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCAGAAGTAGCCACGCCTGACAATAGTGACGAGGAGAGCGGGGACGCCTTCACTGACGGTGATTTTGGTGATTCCGATGATGAAACGCTAGTTGAGCGCCCTGATGAAGCGAAGCCGGCTCACATACCGATCAATGAAGCTGTAAAAGATGATATCCAGAAGAATGCTGCTACTAATGGTCACACTAATGGAAGTGGAGATGAGCATTCTAGAATGAATGGCCGTAAAAATAGTGAAGCTCATTCAAGTGATATGGAAAACCAAAGTTTAGTATTATCGGATTTGCGCCGAGATTCACATGGCGATCAGAATCCGTCAATTGTTGGCATTCTCGGCGACCAGCAGAACCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCGGCGCGAGCTGAAGCGAGGGAGATACGAATGCGTGAGCTCGAGAGGCAGCAACGCGAACAAGAGGACCATGCGGACAAGGCGTACGATATGTATGCGGGGAAGACACCAGAGGCGGTGGGTCGTCGCGGCGCTACGAGGCTGACGGCGCTCAGCCCTGCCGTGCTTTCTCCCAGACGAAGCTCTGAAGACTCCGTCGATGATGGCTTCAGCATGAAGGATCTTAGGCATGAGTTGAAGGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTGGAGCTGCTTAAGGATCGGATAGAGGAGCTGCACGAGGAGTACGCCCAACTGCAGCGGGAACACAGAGAAAAATGCTCATCGTTCGAGCGTCTAAAGCGGGAACATGAGTCTGTATCCCGCGAGCTCGGCGCGGCGCGGGCCGCCGTGCGCGCGCgcgacgccgccgccgccgccgcgggCTTCGCCTTCGTGGACGCGCCCGGGCCTGCGCCCTCCGCCACGGAGCCCGAGCTGGCGCTCGTGACGCAGCAGGCCGAACAGCTGCTCAATGATGCGGGAGAAGGCACGCTAGACGTGCGGTTGCAAAAACTGCTGAGTTCAAAGCAGGCGCTGGAGTCGGAGGTGCGCAAACTGAAACTACAGCTCAACGAGGAGCGCGCCGCCCGACAGAACGGAGTCACCAACCATCACGACCAGGAGTACGAGAATGAACTGGAGACAGTCCGCAAGTCAGTGACGGACGCGAAGGGTCGCGCGGCGCGGGCGGAGGCCGAGGCCGCGCTGCAGGCGGCGCACGTGGCGCGGCTGGAGGCGCAGCTCGCGCGTCTGCGGGCCCGACAGGAGCACCAGGACGAACACGAGGAACAACTCAAGCAGGAACGACGCAAGCTGCAGAGAGAGGCTCGGGAAGCACTGAACCGGGTCGAGGAGTTGGAGACTGAGAACAGCCACCTTACCAAACGACTCGACAAGCTCAAGAACGCCAAGTCAGCGCTACTCAAGGACCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETLVERPDEAKPAHIPINEAVKDDIQKNAATNGHTNGSGDEHSRMNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPEAVGRRGATRLTALSPAVLSPRRSSEDSVDDGFSMKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVSRELGAARAAVRARDAAAAAAGFAFVDAPGPAPSATEPELALVTQQAEQLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKSVTDAKGRAARAEAEAALQAAHVARLEAQLARLRARQEHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -