Basic Information

Insect: Tiliacea aurago
Gene Symbol: lrrfip2
Assembly: GCA_948098905.1
Location: OX402585.1:3147006-3163810[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.011 1.5e+02 2.1 0.6 43 91 53 102 35 107 0.82

2 3 2.5e-81 3.6e-77 260.3 23.7 1 298 122 412 122 414 0.91

3 3 2 2.8e+04 -6.7 14.5 1 49 410 457 410 484 0.62

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.011	1.5e+02	2.1	0.6	43	91	53	102	35	107	0.82
2	3	2.5e-81	3.6e-77	260.3	23.7	1	298	122	412	122	414	0.91
3	3	2	2.8e+04	-6.7	14.5	1	49	410	457	410	484	0.62

Sequence Information

Coding Sequence: ATGGGACAGCGCTCCGAAGTGGCCACGCCTGACAATAGTGACGAGGAGAGCGGGGACGCCTTCACTGATGGAGATTTTGGTGATTCCGATGATGAGACGATCGTTGAACGCCTTGCTGAAGCTAAGCCTGCTCACATACCGATTAATGAAGCTGTAAAAGATGATATTCAGAAGAATGCGGCTACTAATGGTCACTCTAATGGTAGTGTAGATGAGCAGTCGAGAATGAATGGCCGTAAAAATAGTGAAGCTCATTCAAGTGATATGGAAAACCAAAGCTTAGTATTATCGGATTTACGCCGAGATTCACACGGCGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAGCAGAATCATGCGGAGCAAAGGTTAGCAGCGCGACGAGCAGCGCGGGCGGAGGCACGAGAGATACGCATGCGAGAACTGGAGAGGCAGCAGCGGGAACAGGAGGACCATGCCGACAAGGCCTACGATATGTATGCCGGCAAGACACCAGAGACGGTGGGTCGTCGCGCCGCTACGAGGTTAACGGCGCTAAGCCCGGCCGCGCACTCACCAAGACGAAGCTCTGAAGACTCCGTTGATGATGGCTTCAGCATCAAGGATCTTAGGCACGAGTTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCTTGAACGCGCAGCTGGACAACGACAAGGCGGCCCTCGGCTACCAGTTGGAGCTGCTCAAGGACAGGATAGAGGAGCTGCACGAAGAGTACGCGCAGCTGCAGCGCGAACACAGAGAAAAATGCTCATCATTCGAGCGTCTAAAGCGAGAACATGAGTCCGTAACTCGCGAGTTGAGCGCGGCACGAGACGCGGTACGAGCGCGAGACGCGGCGGCTGCGGGTTCGGGCTTTGCCTTCGTGGACGCCGCTGCGCTGGACGTGGAGGCGCGGGGATCCGCGGGCGTCGCCGTGGGCGCCGTGCCCGCGCTGGCGCTCGTCACGCACCAGGCGCACCAGCTGCTGTGTGACGCCGGGGAGGGCACGCTGGACGTGCGGTTGCAAAAGCTGTTAACCTCGAAGCAGGCGCTAGAGTCGGAGGTACGCAAGTTGAAACTACAGCTGAACGAAGAACGTGCCGCGAGACAGAACGGAGTCACCAACCATCACGACGAAGAGTACGAGAATGAACTGGAAACAGTCCGCAAGGCGGTGTCGGACGCGAAGGGCCGCGCGGCGCGGGCGGAGGCCGAGGCGGCGCTGCAGGCCGCGCACGTGGCGCGCCTGGAGGCGCAGCTGGCGCGCCTGCGGGCCCGCCACGACCTACAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGGAAACTGCAGAGAGAGGCTCGGGAAGCACTCAACCGGGTTGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGACAAACTCAAGAACGCGAAGTCAGCACTCCTCAAAGACCTGTGA
Protein Sequence: MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERLAEAKPAHIPINEAVKDDIQKNAATNGHSNGSVDEQSRMNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRAATRLTALSPAAHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVTRELSAARDAVRARDAAAAGSGFAFVDAAALDVEARGSAGVAVGAVPALALVTHQAHQLLCDAGEGTLDVRLQKLLTSKQALESEVRKLKLQLNEERAARQNGVTNHHDEEYENELETVRKAVSDAKGRAARAEAEAALQAAHVARLEAQLARLRARHDLQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00907905;
90% Identity: iTF_00745719;
80% Identity: -