Cleu037064.1
Basic Information
- Insect
- Cerastis leucographa
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963082945.1
- Location
- OY720384.1:20134234-20145047[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.067 2.9e+03 -1.5 0.1 45 91 55 102 40 106 0.69 2 3 6.4e-80 2.8e-75 254.7 23.6 1 298 122 412 122 414 0.91 3 3 1 4.3e+04 -6.4 14.0 1 48 410 456 410 474 0.73
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCCGAAGTGGCCACGCCTGACAATAGTGACGAGGAGAGCGGGGACGCCTTCACTGACGGTGATTTTGGTGATTCCGATGACGAAACGCTAGTCGAACGCCCTGATGAAGCGAAGCCTGCTCACATACCGGTCAATGAAGCTGTAAAAGATGATATTCAGAAGAATGTTGCTACTAATGGCCACACCAATGGTGGTGTAGATGAGCAGCCCAGAATGAATGGCCGAAAGAATAGTGACGCTCATTCGAGTGATATGGAAAACCAAAGCTTAGTATTATCGGATTTGCGCCGAGATTCACACGGTGACCAGAATCCATCAATCGTTGGCATTCTCGGCGATCAGCAGAACCATGCGGAGCAGAGGTTAGCAGCGCGTCGAGCGGCGCGGGCTGAAGCGAGGGAGATACGAATGCGGGAGCTGGAGAGACAGCAGCGGGAACAAGAGGACCATGCGGACAAGGCGTACGATATGTACGCCGGAAAGACACCAGAGACGGTGGGGCGTCGCGGCGCTACGAGGCTGACGGCTCTCAGCCCGGCCGTGCACTCGCCCAGACGAAGCTCTGAAGACTCCGTCGATGATGGCTTCAGTATCAAGGACCTTAGGCACGAGTTGAAGGAAGTAGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGATAACGACAAGGCGGCGCTCGGCTACCAGCTAGAGCTGTTGAAGGACCGGATAGAGGAGCTGCATGAGGAGTATGCACAGTTGCAGCGCGAACACAGAGAAAAATGCTCATCATTCGAGCGTCTAAAGCGCGAACACGAGTCCGTGTCGCGCGAGCTGAGCGCGGCGCGGGACGCCGTGCGCGCGCGGGACGCGGCCGCCGCCGGCGCCGGCTTCGCCTTCGTGGACGCCGCCGCGCTGGAGCCCGCCGCGCGGGACTGCGCCGGCGCCGCCGTGGGCGCCGTGCCCGCGCTGGCGCTCGTCACGCACCAGGCGCAGCAGCTGCTCAATGATGCGGGAGAGGGCACGCTTGACGTGCGGTTGCAAAATCTGCTGAGTTCGAAGCAGGCGCTGGAGTCGGAAGTACGCAAACTGAAGCTGCAGCTGAACGAAGAACGCGCCGCCCGGCAGAACGGAGTCACCAACCATCACGACCAGGAGTACGAGAATGAACTGGAAACAGTGCGAAAATCAGTGTCGGAAGCGAAGGGTCGAGCTGCTCGCGCTGAGGCGGAAGCGGCGCTACAAGCGGCGCACGTGGCGCGACTGGAGGCGCAGCTAGCTCGTCTGCGAGCGAGGCAGGGACACGCTGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGCGAGagGCTCGGGAAGCACTAAACCGGGTCGAGGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGACAAGCTCAAGAACGCGAAGTCGGCACTCCTCAAGGACCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETLVERPDEAKPAHIPVNEAVKDDIQKNVATNGHTNGGVDEQPRMNGRKNSDAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVSRELSAARDAVRARDAAAAGAGFAFVDAAALEPAARDCAGAAVGAVPALALVTHQAQQLLNDAGEGTLDVRLQNLLSSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKSVSEAKGRAARAEAEAALQAAHVARLEAQLARLRARQGHADEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -