Alep030317.1
Basic Information
- Insect
- Athetis lepigone
- Gene Symbol
- lrrfip2
- Assembly
- GCA_033675125.1
- Location
- CM066239.1:19220797-19233660[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.036 1.5e+03 -0.6 0.2 45 91 55 101 38 105 0.71 2 3 1.8e-80 7.4e-76 256.5 29.4 1 297 121 402 121 405 0.91 3 3 0.74 3e+04 -4.9 16.2 1 49 401 448 401 475 0.73
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCCGAACTGGCCACACCTGACAACAGTGATGAGGAGAGCGGGGATGCTTTCACCGACGGAGATTTTGGTGATTCTGGTGACGAAACTCTCGTCGAACGTCTTGATGAGGCTAAGCCTGCTCACTTACCAGTCAATGAAGCTGTTAAAGGTGATCTCCAGAAGAGTGCCGCTACTAATGGTCACTCCAACGGTACTGTAGATGAGCCCAGAATGAATGGTCGTAAAAATAGTGAAGCTCATTCAAGTGATATGGAAAACCAAAGTTTAGTATTATCAGATTTGCGCAGAGACTCACACGGCGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAGCAGAACCATGCGGAGCAGAGGTTAGCGGcgaggcgggcggcgcgggcagAGGCGCGCGAGATTCGGATGCGCGAGCTCGAGAGACAGCAGCGAGAGCAAGAGGACCATGCGGACAAGGCGTACGACATGTACGCCGGCAAGACACCAGAGACGGTGAATCGTCGCGGCGTGACCCGGCTGGCCTCGCTGAGCCCGGCCGTGCATTCGCCCAGGCGGAGCTCTGAGGACTCTGTGGATGATGGCTTCAGCATCAAGGACCTTAGGCACGAGTTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAGCTACTCAAGGACCGGATAGAGGAGCTGCACGAGGAGTATGCGCAACTGCAGCGCGAACACAAAGAAAAATGCTCAGCATTCGAGCGTCTCCGACGCGAGCACGAGTCAGTATCTCGAGAACTGAACGCGGCACGAGACGCAGTACGAGCTCGAGACGCGGCGGCGGAGGACGCGGGCTTCGCCTTCGTGGATGCGGCCGCGCTGGAGACCGATGTGAAGGCCATGCCCGCGCTCGCGCTCGTGTCGCACCAAGCTCACCAGTTGTTGGCCGAGGCTGGAGAGGGCACGCTAGACGTGCGGTTGCAGAAGCTGCTGAGCTCGAAGCAGGCGCTTGAGTCGGAGGTGCGCAAGCTCAAGCTGCAGCTCAACGAGGAGCGAGCCGCCAGACAGAACGGCGTCGCCAACCATCACGACCAGGAGTATGAGAACGAATTGGAGACAGTCCGCAAGGCGGTGTCGGAGGCGAAGGGCCGGGCTGCGCGGGCGGAGGCGGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTGGAGGCGCAGCTAGCTCGGCTGCGAGCTCGGCAGGACCATCAGGACGAGCACGAGGAACAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGCTCGGGAAGCTCTCAACCGGGTTGAAGAGTTGGAGACGGAGAACAGCCACCTTACGAAGCGACTCGACAAGCTCAAGAACGCCAAGTCTGCACTCCTCAAGGACCTGTGA
- Protein Sequence
- MGQRSELATPDNSDEESGDAFTDGDFGDSGDETLVERLDEAKPAHLPVNEAVKGDLQKSAATNGHSNGTVDEPRMNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVNRRGVTRLASLSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSAFERLRREHESVSRELNAARDAVRARDAAAEDAGFAFVDAAALETDVKAMPALALVSHQAHQLLAEAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVANHHDQEYENELETVRKAVSEAKGRAARAEAEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -