Basic Information

Insect: Xestia ashworthii
Gene Symbol: lrrfip2
Assembly: GCA_950022955.1
Location: OX465553.1:3003404-3015656[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.0012 68 4.2 1.5 43 91 53 102 29 107 0.81

2 3 8.6e-81 4.7e-76 257.5 25.0 1 298 122 412 122 414 0.90

3 3 1 5.4e+04 -6.9 15.4 1 49 410 457 410 484 0.62

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.0012	68	4.2	1.5	43	91	53	102	29	107	0.81
2	3	8.6e-81	4.7e-76	257.5	25.0	1	298	122	412	122	414	0.90
3	3	1	5.4e+04	-6.9	15.4	1	49	410	457	410	484	0.62

Sequence Information

Coding Sequence: ATGGGACAGCGCTCCGAAGTAGCCACGCCTGACAATAGTGACGAGGAGAGCGGGGAAGCTTTCACTGACGGTGATTTTGGTGATTCCGATGACGAAACGCTCGTCGAACGGTCTGATGAAGCGAAGCCTGCTCACATACCTATCAATGAAGCTGTAAAAGATGATATTCAGAAGAATGCTACTACTAATGGCCACACCAATAGTAGTGTGGATGAGCAGCCAAGAATGAATGGCCGAAAGAATAGTGAAGATCATTCGAGTGATATGGAAAACCAAAGCTTAGTATTATCGGATTTGCGCCGAGATTCACACGGCGACCAGAATCCCTCTATCGTTGGCATTCTCGGCGATCAGCAGAACCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCGGCTCGCGCTGAGGCGAGGGAGATACGCATGCGTGAGCTGGAGAGGCAGCAGCGCGAACAAGAGGACCATGCGGACAAGGCGTACGATATGTATGCGGGAAAGACACCAGAGACGGTGGGCCGTCGCGGCGCTACGAGGCTGACGGCGCTCAGCCCGGCTGTGCACTCGCCCAGACGGAGTTCTGAAGACTCCATCGATGATGGCTTCAGCGTCAAGGACCTTAGGCACGAGTTGAAGGAAGTGGAGGAGAAATTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCAGCGCTCGGCTACCAGCTGGAGCTGCTCAAGGACCGGATAGAGGAGCTGCACGAGGAGTACGCACAGCTGCAGCGCGAACACAGAGAGAAATGCTCATCGTTCGAGCGTCTAAAGCGTGAACACGAGTCCGTGACGCGCGAGCTGAGCGCGGCGCGGGACGCCGTGCGCGCGCGGGACGCGGCCGCGGCCGGCGCCGGGTTCGCGTTCGTGGACGCCGCCGCGCTGGACGTGGCCGCGCGGGACACGGCGGGGGCCGCGGTGGGCGCGGTGCCCTCGCTGGCGCTCGTCACGCATCAGGCGCAGCAGCTGCTCAATGATGCGGGAGAGGGCACGCTTGACGTGCGGTTGCAAAAGCTGCTGAGCTCGAAGCAGGCGCTGGAGTCCGAGGTGCGCAAACTGAAGCTTCAGCTCAACGAGGAACGCGCCGCGCGACAGAACGGAGTCACCAACCATCACGACCAAGAATACGAGAACGAACTGGAAACAGTCCGCAAGTCGGTGTCGGAGGCGAAGGGTCGCGCGGCGCGCGCGGAGGCGGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTGGAGGCGCAGCTGCAGCGGCTGCGCAAGCGGCAGGACCACGCCGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGCTCGGGAAGCACTGAACCGGGTGGAGGAGTTGGAAACTGAGAACAGCCACCTCACGAAACGACTCGACAAGCTCAAGAACGCGAAGTCGGCGCTCCTCAAGGACCTGTGA
Protein Sequence: MGQRSEVATPDNSDEESGEAFTDGDFGDSDDETLVERSDEAKPAHIPINEAVKDDIQKNATTNGHTNSSVDEQPRMNGRKNSEDHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSIDDGFSVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVTRELSAARDAVRARDAAAAGAGFAFVDAAALDVAARDTAGAAVGAVPSLALVTHQAQQLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKSVSEAKGRAARAEAEAALQAAHVARLEAQLQRLRKRQDHADEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00907905;
90% Identity: iTF_00745719;
80% Identity: -