Eocc018030.1
Basic Information
- Insect
- Eurois occulta
- Gene Symbol
- lrrfip2
- Assembly
- GCA_950022335.1
- Location
- OX465489.1:2431410-2442481[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.085 1.2e+03 -0.3 0.3 43 91 53 102 36 107 0.79 2 3 8.1e-80 1.1e-75 255.9 24.2 1 297 122 411 122 414 0.90 3 3 3 4.1e+04 -7.4 15.4 1 49 410 457 408 484 0.58
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCCGAAGTGGCCACGCCTGACAATAGTGACGAGGAGAGCGGAGAAGCCTTCACTGACGGTGATTTTGGTGATTCCGATGACGAAATGCTCGTCGAACGCCTTGATGAAGCGAAGCCTGCTCACATACCGATCAATGAAGCTGTAAAAGATGATATTCAGAAGAATGCTGCTACTAATGGCCACACCAATGGTAGTGTGGATGAGCACCCCAGAATGAATGGCCGAAAGAATAGTGAAGCTCATTCGAGTGATATGGAAAGCCAAAGCTTAGTATTATCGGATTTGCGCCGAGATTCACACGGCGACCAGAATCCCTCAATCGTTGGCATTCTCGGCGATCAGCAGAACCATGCGGAGCAAAGGTTAGCAGCGCGACGAGCGGCGCGGGCTGAAGCGAGGGAGATAAGAATGCGTGAGCTGGAGAGGCAGCAGCGCGAACAAGAGGACCATGCGGACAAGGCTTACGATATGTATTCGGGAAAGACTCCAGAGACGGTGGGTCGCCGCGGCGCTACGAGGCTGACGGCGCTCAGCCCTGCCGTGCACTCTCCTAGACGAAGCTCTGAAGACTCCATCGATGATGGCTTCAGCATCAAGGACCTTAGGCACGAGTTGAAGGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGATAACGACAAGGCGGCGCTCGGCTATCAGCTGGAGCTGCTGAAGGATCGGATAGAGGAGCTGCACGAGGAGTACGCACAGCTGCagCGCGAACACAGAGAAAAATGTTCATCGTTCGAGCGTCTAAAGCGGGAACACGAGTCCGTGTCCCGCGAGCTCAGCGCGGCGCGGGACGCCGTGCGCGCGCGCGACGCGGCCGCTGCCGGCGCCGGCTTCGCCTTCGTCGACGCCGCCGCGCTGGATGCAGGCGCCAGGGACACGGCCGGCGCCGCCGTCGGGGCCGTGCCGTCCTTGGCGCTGGTCACGCACCAGGCGCAGCAGCTGCTCAATGATGCGGGAGAGGGCACGCTTGACGTGCGGTTGCAAAACCTGCTGAGCTCGAAGCAAGCGTTGGAGTCGGAGGTGCGCAAACTGAAGCTGCAGCTGAACGAGGAGCGCGCCGCCAGGCAGAACGGAGTCACCAACCATCACGACCAGGAGTACGAGAATGAACTGGAAACAGTCCGCAAGGCGGTGTCGGAGGCGAAGGGCCGCGCGGCGCGCGCCGAGGCCGAGGCGGCGCTGCAGGCCGCGCACGTGGCGCGCCTCGAGGCGCAGCTGCAGCGCCTGCGCGCGCGCCAGGACCACGCCGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGCTCGGGAAGCACTCAACCGGGTCGAGGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGACAAGCTCAAGAACGCGAAGTCGGCGCTCCTCAAGGACCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGEAFTDGDFGDSDDEMLVERLDEAKPAHIPINEAVKDDIQKNAATNGHTNGSVDEHPRMNGRKNSEAHSSDMESQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYSGKTPETVGRRGATRLTALSPAVHSPRRSSEDSIDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVSRELSAARDAVRARDAAAAGAGFAFVDAAALDAGARDTAGAAVGAVPSLALVTHQAQQLLNDAGEGTLDVRLQNLLSSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKAVSEAKGRAARAEAEAALQAAHVARLEAQLQRLRARQDHADEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -