Ofas010094.1
Basic Information
- Insect
- Oligia fasciuncula
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963082905.1
- Location
- OY720393.1:20711126-20724611[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.095 1.1e+03 -0.4 0.5 45 91 55 102 36 107 0.75 2 3 5.2e-81 6.1e-77 259.8 25.1 1 297 122 411 122 414 0.90 3 3 3 3.5e+04 -6.8 11.7 1 143 410 456 410 483 0.45
Sequence Information
- Coding Sequence
- ATGGGACAACGCTCTGAAGTGGCCACGCCTGACAATAGTGACGAGGAGAGTGGGGACGCCTTCACTGACGGAGATTTTTGTGATTCCGATGACGAGACGATCGTCGAACGCCTTGATGAAGCTAAGCCTGCTCACATACCGATCAATGAAGCTGTAAAAGATGATATTCAGAAGAGTGCTGCTACTAATGGTGACTCTAATGGTAGTGTCGATGAGCAGCCCAGAATGAATGGTCGTAAAAATAGCGAAGCTCATTCAAGTGATATGGAAAACCAAAGCTTAGTATTATCAGATTTGCGCCGAGATTCACACGGTGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAGCAGAATCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCAGCGCGGGCTGAAGCGCGAGAAATACGCATGCGCGAGCTGGAGAGGCAGCAGCGCGAACAGGAGGACCATGCTGACAAGGCATACGATATGTATGCTGGCAAGACACCAGAGACGGTGGGTCGTCGAGGCGCTACGAGGCTGACGGCGCTCAGCCCGGCCGTGCACTCACCGAGACGAAGCTCTGAAGACTCGGTTGATGATGGCTTCAGCATCAAGGACCTTAGGCATGAGTTGAAAGAGGTCGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCCGCGCTCGGCTACCAGCTGGAGCTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAGTACGCGCAGCTGCAGCGGGAACACAAAGAAAAATGCTCATCGTTCGAGCGTCTAAAGCGGGAGCACGAGTCCGTAACTCGCGAGCTGAGCGCGGCGCGAGACGCCGTGCGAGCGCGAGACGCGGCCGCCGCGGGTGCGGGCTTCGCCTTCGTGGACGCTGCGGCCCTGGACGCGGCCGCGCGACACACTGCGGGCGCGGCCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTGACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGACGTGCGGTTGCAAAAGCTGTTAACCTCGAAGCAGGCGCTAGAGTCAGAAGTACGCAAGTTGAAACTACAGCTGAATGAAGAACGCGCCGCCAGACAGAACGGAGTCACCAACCATCACGACCAAGAGTACGAGAATGAACTGGAGACAGTCCGCAAGGCGGTGTCGGAAGCCAAGGGCCGAGCGGCGCGCGCCGAGGCCGAGGCGGCGCTGCAGGCGGCGCATGTGGCGCGCCTCGAGGCGCAGCTGGCGAGGTCGCGCGCGCGCCAGGAGCACCAGGACGGCCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGCTCGGGAAGCACTCAATCGGGTTGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGACAAACTTAAGAACGCGAAGTCTGCACTCCTCAAAGACCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFCDSDDETIVERLDEAKPAHIPINEAVKDDIQKSAATNGDSNGSVDEQPRMNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSFERLKREHESVTRELSAARDAVRARDAAAAGAGFAFVDAAALDAAARHTAGAAVGAVPALALVTQQAHQLLNDAGEGTLDVRLQKLLTSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKAVSEAKGRAARAEAEAALQAAHVARLEAQLARSRARQEHQDGHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -