Hbla015657.1
Basic Information
- Insect
- Hoplodrina blanda
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949316365.1
- Location
- OX438584.1:15915182-15925720[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.029 7.7e+02 -0.3 0.4 44 91 54 102 36 107 0.76 2 3 5.2e-80 1.4e-75 255.0 24.0 1 287 122 403 122 411 0.88 3 3 0.53 1.4e+04 -4.5 17.5 1 49 412 459 412 485 0.74
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCCGAAGTGGCCACGCCTGACAATAGTGACGAGGAGAGCGGGGACGCTTTCACTGACGGAGATTTTGGTGATTCCGATGAAGAAACCATCGTCGAACGCCTTGATGAGGCCAAGCCTGCTCACATGCCGATTAATGAAGCTGTTAAAGATGATATTCACAAAAGTGCAGCTACTAATGGTCACTCTAATGGTAGTCTAGATGAGCAGCCTAGATTGAATGGCCGTAAGAATAGTGAAGCTCATTCAAGTGATATGGAAAACCAAAGTTTAGTATTATCGGATTTGCGCCGAGATTCACACGGCGATCAGAATCCTTCAATAGTTGGCATTCTCGGCGATCAGCAGAACCATGCAGAGCAGAGGTTAGCAGCGCGACGAGCGGCGCGGGCGGAGGCGCGCGAGATACGCATGCGCGAGCTGGAGAGACAGCAGCGCGAACAGGAGGACCATGCGGACAAGGCGTACGATATGTATGCCGGCAAAACACCAGAGACGGTGAGTCGTCGCGGCGGTACCCGGCTGGCGGCGCTGAGCCCGGCCGTGCACTCACCGAGACGGAGCTCTGAAGATTCCGTTGATGATGGATTCAGTATCAAGGACCTTAGGCACGAGTTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTGGAACTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAGTACGCGCAGCTGCAGCGCGAACACAAAGAAAAGTGCTCATCATTCGAGCGGCTAAAGCGCGAGCACGAGTCCGTATCTCGCGAGCTGAGCGCAGCACGAGACGCAGTACGAGCGCGAGACGCAGCGGCGGAAGGCGCGGGCTTCGCGTTTGTTGACGCGGCGGCGCTGGACGCGGAGGCGCGCGCGAGTGCGGGCGCGGGCGCCGGCGTGGGAGCTGTGCCCGCGCTCGCGCTCGTGTCGCACCAGGCGCACCAGCTGCTCAGCGAAGCCGGGGAGGGGACGCTCGACGTGCGGTTGCAAAAGCTGCTGACCTCGAAGCAGGCGCTAGAGTCGGAGGTGCGCAAGTTGAAGCTGCAGCTGAACGAGGAACGCGCCGCGCGACAGAACGGAGTCACCAACCACCACGACCAGGAGTACGAGAACGAGTTGGAAACGGTACGCAAAGCGGTGTCGGAGGCGAAggggcgcgcggcgcgggcggAGGCGGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTAGCGCGCATGCGCGCGCGACAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGCTCGGGAAGCTCTCAACCGGGTTGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGACAAGCTCAAGAACGCGAAGTCTGCTCTCCTGAAAGACCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDEETIVERLDEAKPAHMPINEAVKDDIHKSAATNGHSNGSLDEQPRLNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVSRRGGTRLAALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSFERLKREHESVSRELSAARDAVRARDAAAEGAGFAFVDAAALDAEARASAGAGAGVGAVPALALVSHQAHQLLSEAGEGTLDVRLQKLLTSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKAVSEAKGRAARAEAEAALQAAHVARLEAQLARMRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -