Pmet011877.1
Basic Information
- Insect
- Phlogophora meticulosa
- Gene Symbol
- lrrfip2
- Assembly
- GCA_905147745.1
- Location
- LR990527.1:16299287-16311095[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.005 1.5e+02 2.2 0.6 43 91 53 102 30 107 0.80 2 3 3.7e-80 1.1e-75 255.5 23.3 1 297 122 414 122 417 0.90 3 3 1 3e+04 -6.9 10.9 129 166 445 482 423 491 0.56
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCCGAAGTGGCCACGCCTGACAATAGCGACGAGGAGAGTGGAGACGCCTTCACCGATGGAGATTTTGGTGATTCCGATGATGAAACTGTCGTCGAACGCCTCGAAGAAGCAAAGCCTGCTCACATACCGATCAATGAAGCTGTAAACGATGATAGTCATAAGACTGCTGCTACTAATGGCCACTCTAATGGTACTGTAGATGACCAGCCTAAAATGAACGGCCGTAAAAATAGTGAAGCTCATTCGAGTGATATGGAAAACCAAAGCTTAGTATTATCGGATTTACGCCGTGATTCACACGGCGATCAGAATCCTTCAATCGTTGGCATTCTTGGCGATCAGCAGAACCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCGGCGCGGGCGGAGGCACGCGAGATACGCATGCGCGAGCTGGAGAGGCAGCAGCGCGAACAGGAGGACCATGCGGACAAGGCGTACGATATGTATGCCGGCAAGACACCAGAGGCGGTGGGTCGTCGCGGAGGTACGAGGCTCACGGCTCTCAGCCCGGCCGTGCACTCGCCGAGACGAAGCTCGGAAGATTCCGTTGATGATGGCTTCAGCATCAAGGACCTTAGGCACGAGCTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAATGACAAGGCGGCACTCGGCTACCAGCTGGAGCTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAGTACGCACAGCTGCAGCGCGAACATAGAGAAAAATGCTCATCGTTCGAGCGTTTAAAGCGGGAGCACGAGTCCGTGAGCCGCGAGCTGGGCGCGGCCCGCGACGCCGTGCTGGCGCGGGACGCGGCGGCAGAGGGCGCGGGCTTCGCGTTCGTGGACGCGGCGGCGCTGGAGCCGGCGGCGCGCGCGCAGGCCGGCGCGCCTGCGGCCGCGCGCGGCGCCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCGCCAGCTGCTCAACGACGCCGGGGAGGGCACGCTGGACGTGCGGTTGCAAAAGCTGTTGAGTTCAAAGCAGGCGCTAGAATCGGAGGTGCGCAAGTTGAAACTACAACTGAACGAGGAGCGCGCCGCGCGGCAGAACGGAGTCGCCAACCATCACGACCAAGAGTACGAGAACGAACTGGACACCGTCCGCAAGTCAGTGGCGGAGGCCAAGACCCGCGCGGCGCGGGCGGAGGCCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGGCTGGAGGCGCAGCTGGCCCGCCTGCGCGCGCGGCAGGACCTGCAGGACGGCCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGCTCGGGAGGCACTCAACCGGGTTGAAGAGTTGGAGACCGAGAACAGCCACCTCACTAAGCGACTCGACAAGCTGAAGAACGCGAAGTCTGCGCTCCTCAAAGACCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETVVERLEEAKPAHIPINEAVNDDSHKTAATNGHSNGTVDDQPKMNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPEAVGRRGGTRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVSRELGAARDAVLARDAAAEGAGFAFVDAAALEPAARAQAGAPAAARGAVPALALVTQQARQLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVANHHDQEYENELDTVRKSVAEAKTRAARAEAEAALQAAHVARLEAQLARLRARQDLQDGHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_00745719;
- 80% Identity
- -