Basic Information

Insect: Oligia latruncula
Gene Symbol: lrrfip2
Assembly: GCA_948474745.1
Location: OX419689.1:19002447-19014018[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.063 7.3e+02 -0.4 0.5 45 91 55 102 36 107 0.75

2 3 3.9e-81 4.5e-77 259.6 25.3 1 297 122 411 122 414 0.90

3 3 2 2.3e+04 -6.3 11.4 2 144 411 457 410 485 0.44

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.063	7.3e+02	-0.4	0.5	45	91	55	102	36	107	0.75
2	3	3.9e-81	4.5e-77	259.6	25.3	1	297	122	411	122	414	0.90
3	3	2	2.3e+04	-6.3	11.4	2	144	411	457	410	485	0.44

Sequence Information

Coding Sequence: ATGGGACAACGCTCTGAAGTGGCCACGCCTGACAATAGTGACGAGGAGAGTGGGGACGCCTTCACTGACGGAGATTTTTGTGATTCCGATGACGAGACGATCGTCGAACGCCTTGATGAAGCTAAGCCTGCTCACATACCGATCAATGAAGCTGTAAAAGATGATATTCAGAAGAGTGCTGCTACTAATGGTGACTCTAATGGTAGTGTCGATGAGCAGCCCAGAATGAATGGTCGTAAAAATAGCGAAGCTCATTCAAGTGATATGGAAAACCAAAGCTTAGTATTATCAGATTTGCGCCGAGATTCACACGGTGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAGCAGAATCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCAGCGCGGGCTGAAGCGCGAGAAATACGCATGCGCGAGCTGGAGAGGCAGCAGCGCGAACAGGAGGACCATGCTGACAAGGCATACGATATGTATGCTGGCAAGACACCAGAGACGGTGGGTCGTCGAGGCGCTACGAGGCTGACGGCGCTCAGCCCGGCCGTGCACTCACCGAGACGAAGCTCTGAAGACTCGGTTGATGATGGCTTCAGCATCAAGGACCTTAGGCATGAGTTGAAAGAGGTCGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAAGCCGCGCTCGGCTACCAGCTGGAGCTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAGTACGCGCAGCTGCAGCGGGAACACAGAGAAAAATGCTCATCGTTCGAGCGTCTAAAGCGGGAGCACGAGTCCGTAACTCGCGAGCTGAGCGCGGCGCGAGACGCCGTGCGAGCGCGAGACGCGGCAGCCGCGGGTGCGGGCTTCGCCTTCGTGGACGCTGCGGCCCTGGACGCGGCCGCGCGGGACTCGGCGGGCGCGGCCGTGGGAGCCGTGCCCGCGCTGGCGCTGGTGACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGACGTGCGGTTGCAAAAGCTGTTAACCTCGAAGCAGGCGCTAGAGTCAGAAGTACGCAAGTTGAAACTACAACTGAATGAAGAACGCGCCGCCAGACAGAACGGAGTCACCAACCATCACGACCAAGAGTACGAGAATGAACTGGAGACAGTCCGCAAGGCGGTGTCGGAAGCCAAGGGTCGCGCGGCGCGCGCCGAGGCCGAGGCGGCGCTGCAGGCGGCGCATGTGGCGCGCCTCGAGGCGCAGCTGGCGAGGTCGCGCGCGCGCCAGGAGCACCAGGACGGCCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGCTCGGGAAGCACTCAATCGGGTTGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGACAAACTCAAGAACGCGAAGTCTGCACTCCTCAAAGACCTGTGA
Protein Sequence: MGQRSEVATPDNSDEESGDAFTDGDFCDSDDETIVERLDEAKPAHIPINEAVKDDIQKSAATNGDSNGSVDEQPRMNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVTRELSAARDAVRARDAAAAGAGFAFVDAAALDAAARDSAGAAVGAVPALALVTQQAHQLLNDAGEGTLDVRLQKLLTSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKAVSEAKGRAARAEAEAALQAAHVARLEAQLARSRARQEHQDGHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00907905;
90% Identity: iTF_00745719;
80% Identity: -