Alat022670.1
Basic Information
- Insect
- Acleris laterana
- Gene Symbol
- Zbtb8a
- Assembly
- GCA_963966035.1
- Location
- OZ014451.1:12843812-12855030[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.00011 0.011 17.3 0.1 3 23 123 143 122 143 0.97 2 19 9.8e-07 9.8e-05 23.7 1.2 1 23 149 171 149 171 0.99 3 19 6.1e-06 0.00061 21.2 2.7 1 23 177 199 177 199 0.99 4 19 4.5e-07 4.5e-05 24.8 1.2 1 23 214 236 214 236 0.99 5 19 0.00025 0.025 16.1 0.9 1 23 277 299 277 299 0.97 6 19 5.6e-05 0.0056 18.2 3.1 1 23 314 336 314 336 0.98 7 19 6.9e-07 7e-05 24.2 1.5 1 23 351 373 351 373 0.99 8 19 0.00017 0.017 16.6 2.8 1 23 379 401 379 401 0.98 9 19 2.9 2.9e+02 3.3 0.1 12 23 439 450 435 450 0.86 10 19 1.2e-05 0.0012 20.3 2.1 1 23 456 478 456 478 0.99 11 19 0.039 3.9 9.2 1.8 1 23 485 507 485 507 0.98 12 19 6.6e-07 6.6e-05 24.2 2.3 1 23 513 535 513 535 0.99 13 19 0.046 4.6 9.0 1.8 1 23 542 564 542 564 0.98 14 19 2.7e-06 0.00027 22.3 1.5 1 23 570 592 570 592 0.99 15 19 0.00051 0.051 15.2 0.7 1 23 599 621 599 621 0.99 16 19 3e-06 0.0003 22.2 1.9 1 23 627 649 627 649 0.98 17 19 0.0022 0.22 13.2 0.3 1 20 655 674 655 677 0.93 18 19 0.00011 0.011 17.2 0.9 2 23 684 705 683 705 0.96 19 19 0.0029 0.29 12.8 0.1 1 18 711 728 711 728 0.93
Sequence Information
- Coding Sequence
- ATGTTCGAGCAGCAGATCAAGGCTGAACCCATGAGCTTCTACACATCCCACGCCCACGTGCACCCGGGCCCGCCGACGCTGGTGCGGGAGCACTCCATCATCAACATGAACCAGCACCACCCCGAGGACTCCAAAGACAGCCTTATCGTGCAACAGCAGGTGCAGCACCAGGACTTGATGGACCACCAGCAGGACCTTCAGCAGGACGATGAGTTAAGCTTTAAGGGGATGGATGATGAAGGAGTCGATATGGATATGGACGGCCGTCAATGCTCACAGGGCATGGGCGTCGACATGGGATCAGTAACAACAAAAATGGAAGTATCTAACGGAGGCCATTCAACACCACGTTCTAAGCCACAGGCCTGtaagGTTTGCGGTAAAGTACTCTCGTCCGCATCGTCATACTACGTCCATATGAAGCTTCATTCAGGAAACAAACCATTTCAGTGCACGGTTTGCGACGCAGCTTTTTGCCGCAAGCCGTACTTAGAGGTGCACATGCGAACCCACACGGGTGAAAGACCCTTCCAATGCGACCTGTGCCTCAAACGATTCACTCAGAAGTCAAGCCTCAACACGCACAAACGCGTCCACACCGATGAGCACATGCGCGCGTTGGTGGCCAAGGAGCGGCCCTACCGCTGCGAGCTGTGCGGCGTGCGCTTCACGCAGAGCTCCAGCCTCAACCGCCACCGGAAAATACACACGGGTGGGTCATTCTCCTGTCCCGCCCTCGGGCCTTCCGCTCTCGCTCCACCTGTTCTCACTTGTTCGATGTCTCGTGCAGAGGAGCACGGTCGCGCGCTGCTGGCTAAGGACCGCCCCTACCAGTGCGGCGTCTGCTATCTGAGATTCACGCAGAAATCGAGTTTGGGCCGCCACGGGAAATTACATACCGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGCCGACATGGGAAAATACATACTGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCGTATCAGTGCGACGTCTGTGACAAGCGGTTCACGCAGAAGTCCAGCCTGGGCACCCACAAGCGTATACACACTGGGGAGCGGCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAGATACATACGGGTATTGGGCGGGGACCGGGCGGCCCGGGCCGCTGCGCGGCGACGTGCGTTACTCGCTTTTGTGTGCACCGGGGCAGCGCAGGCGCGCCCGTCGCGCGCGGGTCCGCGCGCCGCCCCGACCTGGACACTCACATGCGCACGCACACAGGCGAGCGGCCCTATCAGTGCGACGCCTGTCTCAAGCGCTTCACGCAGAAATCCAGCCTCAATATACATAAGCGGACGCACACAGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGTCCCGCCGCCTTCACCTGCAAGCAGTACCTCGAGATCCACACGCGCACGCACACCGGCGAGCGGCCCTATCAGTGCGACATCTGTCTGAAGCGCTTCACGCAGAAATCCAGTCTCAACATCCACAAGCGGACGCACTCAGTGCAGGGCCGGCCCTTCCAGTGCCTGCAGTGCCCCGCCGCCTTCACCTGCAAGCAGTACCTCGAGATACACAACCGCACGCACACCGGCGAGCGGCCCTACCAGTGCGACGTCTGCCTCAAGAGATTCGCGCAAAAGTCCACACTCAACATTCACAAACGAACGCACACAGTGCAAGGTCGGCCGTATCAGTGCATGGAGTGCCCGGCGGCGTTCACTTGCAAGCCGTACCTGGAGATACACATGCGCACGCATACTGGCGAGAGGCCTTTCGAGTGCGATGTCTGTTACAAGCGTTTCACGCAGAAATCGACGCTCAACATTCACAAGCGAATTCACACCGGAGAACGGCCATACGCCTGTGATATATGTCAGAAACGATTTGCCGTGAAGAGCTATGTTACAGCACACAGatGGTCCCACGTGGCCGACAAGCCGCTGAACTGCGACCGCTGCTCCATGACGTTCACGTCGAAGGCCCAGTTCGCGCTGCACATCCGCACGCACTCCGCCAGCTCCTGCTACGAGTGCAGCGTGTGCGGGCGCACCTTCGTGCGGGACAGCTATCTCATTCGGTAA
- Protein Sequence
- MFEQQIKAEPMSFYTSHAHVHPGPPTLVREHSIINMNQHHPEDSKDSLIVQQQVQHQDLMDHQQDLQQDDELSFKGMDDEGVDMDMDGRQCSQGMGVDMGSVTTKMEVSNGGHSTPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALVAKERPYRCELCGVRFTQSSSLNRHRKIHTGGSFSCPALGPSALAPPVLTCSMSRAEEHGRALLAKDRPYQCGVCYLRFTQKSSLGRHGKLHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDVCDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTGIGRGPGGPGRCAATCVTRFCVHRGSAGAPVARGSARRPDLDTHMRTHTGERPYQCDACLKRFTQKSSLNIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHMRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRCSMTFTSKAQFALHIRTHSASSCYECSVCGRTFVRDSYLIR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01437282; iTF_01501382; iTF_01158121; iTF_00077707; iTF_00680813; iTF_00773069; iTF_01209550; iTF_01208511; iTF_00752271; iTF_00913820; iTF_01179663; iTF_00323672; iTF_00204510; iTF_01075713; iTF_01333057; iTF_01492225; iTF_00039074; iTF_00042850; iTF_00267394; iTF_00851010; iTF_01337890; iTF_01430114; iTF_00383907; iTF_00772220; iTF_00447459; iTF_00673667; iTF_00705283; iTF_00834851; iTF_00973987; iTF_01010595; iTF_01145411; iTF_01180483; iTF_01503172; iTF_01548100; iTF_00781189; iTF_00809381; iTF_00968229; iTF_01125669; iTF_01402853; iTF_01538981; iTF_01569541; iTF_00001350; iTF_00073030; iTF_00810310; iTF_01027558; iTF_01362566; iTF_01529382; iTF_00124487; iTF_00723335; iTF_00737671; iTF_01063047; iTF_01282599; iTF_00119784; iTF_00449480; iTF_00709512; iTF_00840424; iTF_01152392; iTF_01154408; iTF_01172584; iTF_00432457; iTF_00906377; iTF_01020521; iTF_01141833; iTF_01141832; iTF_01279497; iTF_01279499; iTF_01340457; iTF_00063786; iTF_00284746; iTF_00429226; iTF_00681802; iTF_00683545; iTF_00682656; iTF_00706250; iTF_00698498; iTF_00696643; iTF_00697573; iTF_00700313; iTF_00726698; iTF_00908143; iTF_00038039; iTF_00623383; iTF_00822186; iTF_01147530; iTF_01494474; iTF_01495927; iTF_01496736; iTF_01564938; iTF_00346027; iTF_00712171; iTF_01094251; iTF_01115851; iTF_01528491; iTF_00172044; iTF_00208108; iTF_00274604; iTF_00290892; iTF_00787862; iTF_00621388; iTF_00699436; iTF_01335245; iTF_01265029; iTF_01339245; iTF_00445422; iTF_00790510; iTF_01429230; iTF_00021519; iTF_00197519; iTF_00300463; iTF_00377295; iTF_00923023; iTF_01030447; iTF_01197999; iTF_01222671; iTF_01417039; iTF_00006448; iTF_00795024; iTF_01064880; iTF_00150865; iTF_00783729; iTF_00785379; iTF_00909873; iTF_01076785; iTF_00177394; iTF_01526317; iTF_00327250; iTF_00446418; iTF_00925042; iTF_01527570; iTF_00075763; iTF_00186483; iTF_00273811; iTF_00279315; iTF_00341523; iTF_01124787; iTF_01416083; iTF_00022996; iTF_00180660; iTF_00778164; iTF_00888500; iTF_01028527; iTF_01166932; iTF_00040085; iTF_00123573; iTF_00248309; iTF_00428341; iTF_01095157; iTF_01436341; iTF_01495189; iTF_00374454; iTF_00430838; iTF_00715958; iTF_00831446; iTF_01084470; iTF_01281526; iTF_01285750; iTF_00819383; iTF_01139095; iTF_00702200; iTF_01336124; iTF_01509783; iTF_01170772; iTF_00704246; iTF_01171643; iTF_00703231; iTF_00701280; iTF_00205368; iTF_00412728; iTF_01504088; iTF_00661529; iTF_00674489; iTF_01073785; iTF_01487897; iTF_01363309; iTF_00364250; iTF_00407770; iTF_00657466; iTF_00889466; iTF_00405243; iTF_00632955; iTF_01148251; iTF_01252027; iTF_00007324; iTF_00041980; iTF_00043767; iTF_00277532; iTF_01093340; iTF_01151388; iTF_00035005; iTF_00071709; iTF_00187357; iTF_00302365; iTF_00406941; iTF_00622173; iTF_01149757; iTF_01342397; iTF_01425309; iTF_01440317; iTF_01490333; iTF_00121662; iTF_00408638; iTF_00802110; iTF_00931710; iTF_01081790; iTF_01144702; iTF_01142539; iTF_01141078; iTF_00958105; iTF_01148986; iTF_00076799; iTF_00185503; iTF_01221814; iTF_00288223; iTF_01359949; iTF_00025393; iTF_01062079; iTF_01063962; iTF_00758464; iTF_00761888; iTF_00852032;
- 90% Identity
- iTF_01464362;
- 80% Identity
- -