Cpun012922.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cyclophora punctaria
Gene Symbol
-
Assembly
GCA_951394245.1
Location
OX596182.1:5523297-5533900[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 9.5e-05 0.007 17.1 0.1 3 23 125 145 124 145 0.97
2 19 8.6e-07 6.4e-05 23.6 1.2 1 23 151 173 151 173 0.99
3 19 5.3e-06 0.0004 21.1 2.7 1 23 179 201 179 201 0.99
4 19 1.8e-06 0.00013 22.6 2.5 1 23 216 238 216 238 0.99
5 19 6.5e-05 0.0048 17.7 0.8 1 23 253 275 253 275 0.98
6 19 4.9e-05 0.0036 18.1 3.1 1 23 290 312 290 312 0.98
7 19 3.4e-07 2.5e-05 24.8 1.5 1 23 327 349 327 349 0.99
8 19 0.00015 0.011 16.5 2.8 1 23 355 377 355 377 0.98
9 19 0.00017 0.013 16.3 0.0 1 23 384 406 384 406 0.97
10 19 1.1e-05 0.00079 20.1 2.1 1 23 412 434 412 434 0.99
11 19 0.034 2.6 9.1 1.8 1 23 441 463 441 463 0.98
12 19 5.8e-07 4.3e-05 24.1 2.3 1 23 469 491 469 491 0.99
13 19 0.04 3 8.9 1.8 1 23 498 520 498 520 0.98
14 19 2.4e-06 0.00017 22.2 1.5 1 23 526 548 526 548 0.99
15 19 0.0036 0.27 12.2 0.8 1 23 555 577 555 577 0.99
16 19 2.6e-06 0.00019 22.1 1.9 1 23 583 605 583 605 0.98
17 19 0.0019 0.14 13.0 0.3 1 20 611 630 611 633 0.93
18 19 3.7e-05 0.0027 18.4 1.4 2 23 640 661 639 661 0.96
19 19 3.4e-06 0.00025 21.7 1.4 1 23 667 690 667 690 0.97

Sequence Information

Coding Sequence
ATGTTTGAGCAGCAGATCAAAGCCGAACCAATGAGTTTCTACTCATCGCACGGGCACGTGCACGGCGGCGGGCTGGCGCGCGACTCGCACCCGCTCATTATGAGCCAGCACCTGTCACACGAAGACTCCAAGGACAGCCTCGTCATCCAGCAGCCCACGCCGCACGCAGAGCTGCTCGACCACCACCACCATCAGGACATGCAGCCACAGGATGATGAGcTAAGCTTTAAAGGCATGGAAGATGAAGGGGTCGAAATGGATATGGATGGCCAACAGTGTTCACagGGTATGGGCGTGAACATGGGATCAGTTCAGACCAAAATGGAGATTACCAACGGAGGTCAAGGCACGCCCCGATCAAAACCGCAGGCCTGTAAGGTCTGCGGCAAAGTCCTTTCGTCCGCTTCTTCATATTACGTCCACATGAAGCTTCATTCGGGAAACAAGCCTTTCCAATGCACAGTCTGCGACGCGGCATTCTGCCGGAAGCCATATCTAGAAGTACACATGCGCACGCACACAGGCGAACGCCCGTTTCAATGCGACCTCTGTCTCAAACGGTTCACGCAAAAATCCAGCTTGAATACGCACAAACGCGTACACACAGATGAGCACATGCGCGCCTTGATGGTGAAGGACCGGCCCTACAAGTGTGACCTCTGTCAGATGCGGTTCACGCAGAGCTCCAGCCTCAACAGACACAGGAAAATACACACGGAGGAACACAAACGCGCCCTGCTGGCTAAGGACCGGCCCTACCAGTGCGGCATCTGCTTTCTGAGATTCACCCAGAAATCGAGTTTGGGCCGGCACGGAAAAATACACACCGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGACGTCATGGGAAAATACACACTGAGGAGCACATGCAATCGCTGATCAACAAAGTGCGCCCCTATCAATGCGACATCTGTGACAAGCGGTTCACTCAGAAGTCCAGCCTTGGCACTCATAAACGTATACACACCGGGGAGCGGCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAAATACATACGGTGCAAGGGCGACCATTCGCGTGCGGGCAATGCCCGGCGGCGTTCGCCCGCCGCCCCTACCTGGACATTCACATGCGCACGCACACAGGCGAGCGGCCGTATCAGTGCGACGCGTGTCTCAAGCGCTTCACGCAGAAGTCCAGCCTCAATATACATAAGCGGACGCACACAGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGCCCCGCCGCCTTCACCTGCAAGCAATACCTGGAGATACACACGCGCACGCACACCGGCGAGCGGCCCTATCAGTGCGACATCTGCTTGAAGCGCTTCACGCAGAAGTCCAGTCTCAACATCCACAAGCGGACGCACTCAGTGCAAGGCCGGCCCTTCCAGTGCCTGCAGTGCCCGGCCGCCTTCACCTGCAAGCAGTACCTCGAGATCCACAACCGCACGCACACCGGCGAGCGCCCCTACCAGTGCGACGTCTGCCTCAAGAGATTCGCGCAAAAGTCCACCCTCAACATACACAAGAGAACGCACACAGTCCAGGGCCGGCCGTACCAGTGCATGGAGTGCCCGGCCGCGTTCACGTGCAAGCCGTACCTGGAGATCCACACGCGCACTCACACGGGCGAGCGCCCCTTCGAGTGCGATGTGTGTTACAAACGCTTCACGCAGAAGTCCACGCTCAACATCCACAAGCGAATCCACACCGGCGAGCGTCCCTACGCTTGTGATATATGCCAGAAGCGTTTTGCTGTGAAGAGCTACGTCACCGCTCACAGATGGTCGCACGTGGCCGACAAGCCGCTGAACTGCGACCGCTGCTCGATGACGTTCACGTCCAAGTCGCAGTTCGCGCTGCACATCCGCACGCACTCCACCGGGCCCTGCTACGAGTGCAGCGTCTGCGGCCGCACCTTCGTACGGGACAGCTACCTTATACGACACCACAACCGCGTGCACCGCGACAACCACAGCAACGTGTCCGCCAACAGCTTGGGCAACATCAACAGCGTCGCAACTAACACCAACAACTCCAATAATGGCAGCTTTGACTCGCCCGGTGTTTGCGACTTGAGCTTCGTGCCAATGGTCAACCGGTACATGACCTCCCAAGGCACACAGGTGTCGATGCAAGACTCGCAGAGCAAGATGTCGGCCATGTCACCGCAATCTATTGCGTCTATTTCGTCGCCGCCGCCCCCGCACACCCCTACGCCCCAACCCCAAATGTCTGGTCAGATGCACCTTGCAGACTGA
Protein Sequence
MFEQQIKAEPMSFYSSHGHVHGGGLARDSHPLIMSQHLSHEDSKDSLVIQQPTPHAELLDHHHHQDMQPQDDELSFKGMEDEGVEMDMDGQQCSQGMGVNMGSVQTKMEITNGGQGTPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALMVKDRPYKCDLCQMRFTQSSSLNRHRKIHTEEHKRALLAKDRPYQCGICFLRFTQKSSLGRHGKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHMQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTVQGRPFACGQCPAAFARRPYLDIHMRTHTGERPYQCDACLKRFTQKSSLNIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRCSMTFTSKSQFALHIRTHSTGPCYECSVCGRTFVRDSYLIRHHNRVHRDNHSNVSANSLGNINSVATNTNNSNNGSFDSPGVCDLSFVPMVNRYMTSQGTQVSMQDSQSKMSAMSPQSIASISSPPPPHTPTPQPQMSGQMHLAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00010401;
90% Identity
iTF_00406941; iTF_01444105;
80% Identity
-