Zpyr024225.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zeuzera pyrina
Gene Symbol
-
Assembly
GCA_907165235.1
Location
OU015632.1:11452488-11475324[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 8.8e-05 0.011 17.4 0.1 3 23 30 50 29 50 0.97
2 18 8e-07 0.0001 23.9 1.2 1 23 56 78 56 78 0.99
3 18 5e-06 0.00062 21.4 2.7 1 23 84 106 84 106 0.99
4 18 3.3e-06 0.00041 21.9 2.6 1 23 121 143 121 143 0.98
5 18 4.5e-05 0.0057 18.3 3.1 1 23 158 180 158 180 0.98
6 18 3.2e-07 4e-05 25.1 1.5 1 23 195 217 195 217 0.99
7 18 0.00014 0.018 16.8 2.8 1 23 223 245 223 245 0.98
8 18 5.2e-05 0.0065 18.2 0.1 1 23 252 274 252 274 0.99
9 18 9.9e-06 0.0012 20.4 2.1 1 23 280 302 280 302 0.99
10 18 0.032 4 9.4 1.8 1 23 309 331 309 331 0.98
11 18 5.3e-07 6.7e-05 24.4 2.3 1 23 337 359 337 359 0.99
12 18 0.037 4.6 9.2 1.8 1 23 366 388 366 388 0.98
13 18 2.2e-06 0.00027 22.5 1.5 1 23 394 416 394 416 0.99
14 18 0.00041 0.052 15.3 0.7 1 23 423 445 423 445 0.99
15 18 2.4e-06 0.0003 22.4 1.9 1 23 451 473 451 473 0.98
16 18 0.0018 0.22 13.3 0.3 1 20 479 498 479 501 0.93
17 18 3.3e-05 0.0041 18.8 1.3 2 23 508 529 507 529 0.96
18 18 3.1e-06 0.00039 22.0 1.4 1 23 535 558 535 558 0.97

Sequence Information

Coding Sequence
ATGGGGGTGGATATGGGATCAATTCAAACTAAAATGGAAGTATCAAATGGTGGTGGACAATCAGCACCCCGTTCTAAACCACAGGCCTGTAAGGTTTGTGGCAAGGTACTGTCATCAGCTTCATCATATTACGTTCACATGAAGCTCCACTCTGGAAACAAACCCTTCCAATGCACAGTCTGCGATGCCGCTTTCTGTCGTAAGCCATACCTTGAGGTTCATATGCGCACGCACACAGGCGAACGTCCTTTTCAGTGCGACCTATGTCTCAAGCGATTTACACAGAAGTCAAGTCTCAATACGCACAAACGTGTCCACACTGATGATCACATGCGCGCGTTGATGGTGAAGGACCGGCCGTACAAGTGTGAGCTCTGTCAGATGCGGTTCACGCAGAGCTCCAGCCTCAACCGACACAAGAAAATACACACGGAGGAGCACAGACGAGCCCTGTTAGAAAAAGTGCGTCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGTCGACATGGGAAAATACACACTGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGTCCCTATCAGTGCGACATCTGTGACAAGCGGTTCACTCAGAAGTCCAGCCTGGGCACTCATAAACGTATTCATACTGGGGAGCGGCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAAATACATACGGTGCAAGGGCGTCCTTTCACGTGCGGGCAATGCCCGGCGGCGTTCGCCCGCCGCCCCTACCTGGACATTCACATGCGCACGCACACAGGCGAGCGGCCATATCAGTGCGACGCGTGTCTCAAGCGCTTCACGCAGAAGTCCAGCCTCAATATACATAAGAGGACGCACACAGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGCCCCGCCGCGTTCACCTGCAAGCAATACCTGGAGATACACACGCGCACCCACACCGGCGAGCGGCCCTATCAATGCGACATCTGCCTGAAACGGTTCACGCAGAAATCGAGTCTCAACATACACAAGCGGACGCACTCAGTGCAGGGCCGGCCGTTCCAGTGCCTGCAGTGCCCCGCCGCCTTCACGTGCAAGCAATACCTCGAGATACACAACAGGACGCACACGGGCGAGCGGCCCTACCAATGCGATGTATGTCTCAAGAGATTCGCGCAAAAGTCGACACTCAATATACACAAACGAACGCACACAGTGCAAGGTCGTCCGTACCAGTGCATGGAGTGTCCAGCCGCGTTCACTTGCAAGCCCTATCTGGAGATTCATATGAGAACGCACACTGGCGAACGGCCCTTTGAGTGCGATGTCTGTTACAAACGCTTCACTCAGAAATCGACACTCAACATTCACAAGCGAATTCATACCGgtgAACGTCCATATGCTTGTGATATATGTCAAAAAAGATTTGCTGTGAAGAGTTATGTCACGGCCCACAGGTGGTCTCACGTGGCCGACAAGCCTCTGAACTGTGAACGGTGTTCGATGACGTTTACGTCCAAGTCGCAGTTCGCCTTGCACATACGTACGCATTCGGCTGGCTCGTGCTACGAGTGCAGCGTCTGTGGGCGCACATTCGTCCGCGACAGCTATCTGATAAGACATCACAACCGCGTGCACCGTGAGAACCATAGTAATGTGTCGGCCAACAGCATCGGTACCATCAACAGCGCCGCCACCAACACCAACAATTCCAATAACAGCAGCTTCGATTCCCCTGGCGTTTGTGACTTAAgCTTTGTACCAATGGTGAACCGCTACATGACTTCTCAAGGTACACAAGTGTCGATGCAAGACACACAGAGTAAAATGTCAGCCATGTCACCACAGTCCATCGCATCAATATCATCACCCCCTCCTCCTCACACACCCACGCCGCAACCGCAAATGTCGGGTCAGATGCATCTCGCCGACTGA
Protein Sequence
MGVDMGSIQTKMEVSNGGGQSAPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDDHMRALMVKDRPYKCELCQMRFTQSSSLNRHKKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTVQGRPFTCGQCPAAFARRPYLDIHMRTHTGERPYQCDACLKRFTQKSSLNIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHMRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCERCSMTFTSKSQFALHIRTHSAGSCYECSVCGRTFVRDSYLIRHHNRVHRENHSNVSANSIGTINSAATNTNNSNNSSFDSPGVCDLSFVPMVNRYMTSQGTQVSMQDTQSKMSAMSPQSIASISSPPPPHTPTPQPQMSGQMHLAD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00010401;
90% Identity
iTF_00041088;
80% Identity
-