Epro008113.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eudemis profundana
Gene Symbol
-
Assembly
GCA_947034915.1
Location
CAMQQJ010000066.1:529722-544926[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.00017 0.014 17.1 0.1 3 23 129 149 128 149 0.97
2 19 1.6e-06 0.00013 23.5 1.2 1 23 155 177 155 177 0.99
3 19 9.8e-06 0.00079 21.0 2.7 1 23 183 205 183 205 0.99
4 19 1.1e-06 8.5e-05 24.0 1.4 1 23 220 242 220 242 0.98
5 19 0.0002 0.016 16.9 0.7 1 23 257 279 257 279 0.98
6 19 9e-05 0.0072 18.0 3.1 1 23 294 316 294 316 0.98
7 19 6.2e-07 5e-05 24.7 1.5 1 23 331 353 331 353 0.99
8 19 0.00028 0.022 16.4 2.8 1 23 359 381 359 381 0.98
9 19 0.00011 0.0086 17.7 0.0 1 23 434 456 434 456 0.99
10 19 2e-05 0.0016 20.0 2.1 1 23 462 484 462 484 0.99
11 19 0.063 5.1 9.0 1.8 1 23 491 513 491 513 0.98
12 19 1.1e-06 8.5e-05 24.0 2.3 1 23 519 541 519 541 0.99
13 19 0.073 5.9 8.8 1.8 1 23 548 570 548 570 0.98
14 19 4.3e-06 0.00035 22.1 1.5 1 23 576 598 576 598 0.99
15 19 0.00082 0.066 14.9 0.7 1 23 605 627 605 627 0.99
16 19 4.8e-06 0.00038 22.0 1.9 1 23 633 655 633 655 0.98
17 19 0.0035 0.28 13.0 0.3 1 20 661 680 661 683 0.93
18 19 6.7e-05 0.0054 18.3 1.4 2 23 690 711 689 711 0.96
19 19 6.2e-06 0.0005 21.6 1.4 1 23 717 740 717 740 0.97

Sequence Information

Coding Sequence
ATGTTCGAGCAACAGATCAAGGCTGAACCCATGAGCTTCTACTCATCCCACGCCCACGTCCACCCCGGCCCGCCCACGATCGTCCGCTCCGACTCCAACCATGCCATCATCAACATGAACCAGCATCACCCGGAAGACTCCAAGGACAGCCTCATAGTGCAGCAGCAGGTGCAGCATCAGCAGGATCTGATGGACCAACACCAACAGCAGGATTTGCAGCAGGATGATGAGttAAGCTTTAAAGGAATGGATGATGAAGGTGTGGAAATGGATATGGATGGCCGCCAATGCTCTCAGGGCTTAGGCGTCGATATGGGTTCAGTACAAACAAAAATGGAAGTATCAAATGGAGGCCAATCAACACCTCGATCAAAACCACAAGCCTGTAAGGTTTGCGGTAAAGTACTCTCGTCCGCTTCATCTTACTACGTCCATATGAAGCTTCATTCCGGAAACAAGCCTTTCCAGTGCACGGTTTGCGACGCAGCATTCTGCCGCAAGCCGTACCTTGAGGTGCACATGCGCACCCACACGGGCGAGAGACCCTTCCAGTGCGACCTGTGCCTCAAGCGTTTCACGCAGAAGTCCAGCCTCAACACGCACAAGCGCGTCCACACCGATGAGCACATGCGCGCCTTGATGGTGAAGGAGCGGCCCTACAAGTGTGAGCTCTGTGGCGTCAGGTTCACGCAGAGCTCCAGCCTCAACCGCCACAAGAAAATACACACGGAGGAACACAGACGCGCGCTGCTGGCCAAGGAACGGCCCTACCAATGTGGCGTCTGCTATCTGAGATTCACGCAGAAGTCGAGTTTGGGCCGGCACGGAAAGATACATACCGAAGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGCCGACATGGGAAAATACATACTGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCGTATCAGTGCGACATCTGTGACAAGCGGTTCACGCAGAAGTCCAGCCTGGGCACTCATAAACGTATACACACTGGGGAGCGGCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAGATACATACGGGTACCGAATCTAAAACGGGGTCAAAATTGGGGTTTCGGTCGCCGCTCGCGACGGATTCGGTCGGGATCGGCAGCGGCCGGCCGCTGGGCCCGCGTCGGCGACGTGCGTTACTCGCTTTTGTGTGTGCACTGGGCGCAGTGCAAGGGCGTCCTTACACCTGCGGGCTTTGCCCGGCGGCCTTCGCCCGCCGCCCCTACCTGGACATTCACATGCGCACGCACACAGGCGAGCGGCCCTATCAGTGCGACGCCTGTCTCAAGCGCTTCACGCAGAAGTCCAGCCTCAATATACATAAGAGGACGCACACAGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGCCCCGCCGCCTTCACGTGCAAGCAGTACCTGGAGATACACACGCGCACCCACACCGGCGAGCGGCCCTATCAGTGCGACATCTGCCTGAAGCGCTTCACGCAGAAATCCAGCCTCAACATCCACAAGCGGACGCATTCAGTGCAGGGCCGGCCCTTCCAGTGTCTCCAGTGTCCCGCCGCCTTCACGTGCAAGCAGTACTTGGAGATCCACAACCGCACCCACACGGGCGAGAGGCCCTACCAGTGCGATGTCTGCCTCAAGAGATTCGCGCAAAAGTCCACACTCAACATACATAAACGAACGCACACAGTGCAAGGTCGGCCGTACCAATGCATGGAGTGCCCGGCCGCGTTCACTTGCAAGCCGTACTTGGAGATTCACATGAGGACTCACACCGGCGAGAGACCTTTTGAGTGCGATGTCTGTTACAAGCGCTTCACGCAGAAATCGACGCTCAACATTCACAAGCGAATTCACACCGGAGAACGGCCATATGCCTGTGACATATGTCAGAAACGATTCGCTGTCAAGAGCTATGTAACAGCACAcagATGGTCGCATGTGGCCGACAAACCGCTGAACTGCGACCGATGCTCGATGACGTTCACTTCCAAGTCCCAGTTCGCGCTCCACATACGCACGCACACGGCCGGCTCCTGCTACGAGTGCAGCGTCTGCGGCCGCACCTTTGTCCGGGACAGCTATTTAATACGACACCACAATCGCGTGCACCGCGAGAACCATAGCAACGTGTCGGCGAACAGCATCGGAACCATCAACAGCGTCGCAACTAACACCAATAACTCGAACAACAGCAACTTCGATTCGCCTGGCGTTTGTGACTtaagcttTGTTCCTATGGTGAATCGTTATATGACTTCCCAAGGAACGCAGGTGTCCATGCAAGATACGAGCAAGATGTCTGCGATGTCGCCGCAATCTATTGCGTCGATATCTTCGCCGCCTCCGCCGCACACACCCACTCCGCAGCCCCAAATGTCGGGTCAGATGCATCTGACTGACTGA
Protein Sequence
MFEQQIKAEPMSFYSSHAHVHPGPPTIVRSDSNHAIINMNQHHPEDSKDSLIVQQQVQHQQDLMDQHQQQDLQQDDELSFKGMDDEGVEMDMDGRQCSQGLGVDMGSVQTKMEVSNGGQSTPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALMVKERPYKCELCGVRFTQSSSLNRHKKIHTEEHRRALLAKERPYQCGVCYLRFTQKSSLGRHGKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTGTESKTGSKLGFRSPLATDSVGIGSGRPLGPRRRRALLAFVCALGAVQGRPYTCGLCPAAFARRPYLDIHMRTHTGERPYQCDACLKRFTQKSSLNIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHMRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRCSMTFTSKSQFALHIRTHTAGSCYECSVCGRTFVRDSYLIRHHNRVHRENHSNVSANSIGTINSVATNTNNSNNSNFDSPGVCDLSFVPMVNRYMTSQGTQVSMQDTSKMSAMSPQSIASISSPPPPHTPTPQPQMSGQMHLTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00010401;
90% Identity
iTF_00022996;
80% Identity
-