Evul015647.4


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia vulgata
Gene Symbol
-
Assembly
GCA_946478135.1
Location
CAMLCK010000077.1:3038181-3055132[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.00012 0.0088 17.1 0.1 3 23 175 195 174 195 0.97
2 18 1.1e-06 8e-05 23.5 1.2 1 23 201 223 201 223 0.99
3 18 6.7e-06 0.0005 21.0 2.7 1 23 229 251 229 251 0.99
4 18 8.4e-06 0.00063 20.7 2.1 1 23 266 288 266 288 0.98
5 18 0.00017 0.013 16.6 0.6 1 23 303 325 303 325 0.98
6 18 6.1e-05 0.0046 18.0 3.1 1 23 340 362 340 362 0.98
7 18 7.6e-07 5.7e-05 24.0 1.5 1 23 377 399 377 399 0.99
8 18 0.00019 0.014 16.5 2.8 1 23 405 427 405 427 0.98
9 18 1.3e-05 0.00099 20.1 2.1 1 23 433 455 433 455 0.99
10 18 0.043 3.2 9.0 1.8 1 23 462 484 462 484 0.98
11 18 7.2e-07 5.4e-05 24.1 2.3 1 23 490 512 490 512 0.99
12 18 0.05 3.7 8.9 1.8 1 23 519 541 519 541 0.98
13 18 2.9e-06 0.00022 22.2 1.5 1 23 547 569 547 569 0.99
14 18 0.00056 0.042 15.0 0.7 1 23 576 598 576 598 0.99
15 18 3.1e-06 0.00023 22.1 1.8 1 23 604 626 604 626 0.98
16 18 0.0024 0.18 13.0 0.3 1 20 632 651 632 654 0.93
17 18 4.6e-05 0.0034 18.4 1.4 2 23 661 682 660 682 0.96
18 18 4.2e-06 0.00031 21.7 1.4 1 23 688 711 688 711 0.97

Sequence Information

Coding Sequence
ATGTTTTCAGGAAGGGAAGATTTAACATGGGGAAGCATCAACAGCGCCATTAGTTTCCCGGCGCATTGGGGCGTGGGCGTCGGGGGAATGGCACGGGGCATGGGGGTCCCTGTGCCACCTCCCGGCGACCTACTCTCCACTATAGCCATGTTCGAACAGCAAATTAAAGCTGAACCCATGAACTTCTACCACCCACACGTCCCCCACGTGCACCCTGGGCCGCCTACGATAGGGCGCTCGGAGTCGAACCACCACCTCATGAACCCGCATCACCATGAAGACTCCAAGGAAAGCCTCATACAACATCAAGTACAACACCAGCAGGATCTCATGGAACAACATCAGCAACAGGAAATGCAACAAGATGATGAGCTGAGCTTCAAAGGAATGGACGATGAAGGTGTGGATATGGATATGGATGGCAGACAGTGTTCACagGGTTTGGTGGTGGACATGGGTTCAGTGCAAACAAAAATGGAGGTCAATGGCGGTCAGTCCACACCAAGATCTAAACCACAGGCCTGTAAGGTTTGCGGCAAAGTCCTTTCGTCCGCTTCTTCATATTACGTCCACATGAAGCTTCATTCGGGAAACAAGCCTTTCCAATGCACAGTGTGCGATGCTGCGTTTTGCCGGAAGCCTTACCTCGAAGTCCATATGCGCACGCACACAGGCGAACGCCCGTTCCAATGCGATTTGTGCCTTAAGCGCTTCACACAGAAGTCAAGTTTGAATACGCACAAGCGAGTGCACACGGATGAGCACTTGCACGCGTTGGTGGTGAAGGACCGGCCCTACAGTTGTGAACTCTGTCAGATGCGGTTCACGCAGAGTTCCAGCCTCAACCGACACAAGAAAATACACACGGAGGAACACAGACGCGCTCTGCTGGTCAAGGATCGGCCCTACCAATGCGGAATCTGCTTTGTGAGATTCACCCAGAGATCGAGTTTGGGCCGGCACGGGAAAATACATACCGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTCGGACGTCATGGGAAAATACACACTGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGTCCGTATCAGTGCGACGTCTGTGACAAGCGGTTCACGCAGAAATCCAGCCTTGGTACTCATAAGCGTATACACACTGGGGAGCGGCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAGATACATACGGGCGAGCGGCCCTATCAGTGCGACGCCTGTCTCAAGCGATTCACGCAGAAGTCGAGCCTCAATATACATAAGAGGACGCATTCAGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGCCCCGCCGCCTTCACCTGCAAGCAATACCTGGAGATACACACGCGCACGCACACCGGCGAGCGCCCATATCAGTGCGACATCTGCCTGAAGCGCTTCACGCAGAAGTCCAGTCTCAACATCCACAAGCGGACGCACTCAGTCCAAGGCCGGCCCTTCCAGTGCCTGCAGTGCCCGGCCGCTTTCACCTGCAAACAGTACTTGGAGATCCACAATCGCACGCACACGGGAGAACGCCCCTACCAATGCGACGTTTGCCTCAAACGATTCGCTCAAAAGTCCACACTCAACATCCACAAACGAACGCACACAGTGCAAGGGCGCCCGTACCAATGCATGGAGTGCCCAGCCGCGTTCACTTGCAAGCCGTATCTGGAAATTCACATGCGCACGCACACCGGCGAGCGCCCTTTCGAGTGCGAAGTCTGTTACAAACGGTTCACGCAGAAATCTACGCTCAACATCCACAAGCGAATTCACACTGGTGAACGCCCATACGCTTGCGATATTTGCCAGAAGCGTTTTGCTGTGAAGAGTTACGTAACAGCACACAGATGGTCCCACGTCGCAGACAAGCCTCTAAACTGCGATCGCTGCTCGATGACGTTCACGTCTAAGTCTCAGTTCGCGCTGCACATCCGCACACACACGGCCGGACCGTGCTACGAGTGCAGCGTGTGCGGACGGACCTTCGTCAGGGACAGCTACCTTATACGCCACCACAACCGCGTTCACCGTGACAACCACAGCAACATGTCAGCAAACAGCATTGGCAATTTGAACTCCGTCGCTACCAACACCAATTCTAACaatggcgggttcgattctccgGGTGGTGTCTGTGATTTGAGCTTTGTCCCGATGGTGAACCGTTACATGACGTCACAGGGCACCCAGGTGTCGATGCAAGATGCCCAGAAGATGCAAGCTATGTCGCCACAGTCCATCGCCTCTATTTCCTCGCCCCCGCCACCTCATACGCCGACGCCCCAGCCCCAGATGTCTGGCCCACTGCACATGGCAGACTGA
Protein Sequence
MFSGREDLTWGSINSAISFPAHWGVGVGGMARGMGVPVPPPGDLLSTIAMFEQQIKAEPMNFYHPHVPHVHPGPPTIGRSESNHHLMNPHHHEDSKESLIQHQVQHQQDLMEQHQQQEMQQDDELSFKGMDDEGVDMDMDGRQCSQGLVVDMGSVQTKMEVNGGQSTPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHLHALVVKDRPYSCELCQMRFTQSSSLNRHKKIHTEEHRRALLVKDRPYQCGICFVRFTQRSSLGRHGKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDVCDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTGERPYQCDACLKRFTQKSSLNIHKRTHSVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHMRTHTGERPFECEVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRCSMTFTSKSQFALHIRTHTAGPCYECSVCGRTFVRDSYLIRHHNRVHRDNHSNMSANSIGNLNSVATNTNSNNGGFDSPGGVCDLSFVPMVNRYMTSQGTQVSMQDAQKMQAMSPQSIASISSPPPPHTPTPQPQMSGPLHMAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00010401;
90% Identity
iTF_00737671;
80% Identity
-