Dpha013352.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dryadula phaetusa
Gene Symbol
-
Assembly
GCA_032432895.1
Location
JAOYRS010000054.1:5148118-5157240[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.0001 0.0077 17.1 0.1 3 23 131 151 130 151 0.97
2 18 9.1e-07 7e-05 23.5 1.2 1 23 157 179 157 179 0.99
3 18 5.7e-06 0.00043 21.0 2.7 1 23 185 207 185 207 0.99
4 18 3.7e-06 0.00029 21.6 2.6 1 23 222 244 222 244 0.98
5 18 5.2e-05 0.004 18.0 3.1 1 23 259 281 259 281 0.98
6 18 3.6e-07 2.8e-05 24.8 1.5 1 23 296 318 296 318 0.99
7 18 0.00016 0.012 16.5 2.8 1 23 324 346 324 346 0.98
8 18 6.9e-05 0.0052 17.6 0.2 1 23 410 432 410 432 0.99
9 18 1.1e-05 0.00086 20.1 2.1 1 23 438 460 438 460 0.99
10 18 0.037 2.8 9.0 1.8 1 23 467 489 467 489 0.98
11 18 6.1e-07 4.7e-05 24.1 2.3 1 23 495 517 495 517 0.99
12 18 0.042 3.2 8.8 1.8 1 23 524 546 524 546 0.98
13 18 2.5e-06 0.00019 22.2 1.5 1 23 552 574 552 574 0.99
14 18 0.00047 0.036 15.0 0.7 1 23 581 603 581 603 0.99
15 18 2.7e-06 0.00021 22.0 1.9 1 23 609 631 609 631 0.98
16 18 0.002 0.15 13.0 0.3 1 20 637 656 637 659 0.93
17 18 3.8e-05 0.0029 18.4 1.3 2 23 666 687 665 687 0.96
18 18 3.6e-06 0.00027 21.7 1.4 1 23 693 716 693 716 0.97

Sequence Information

Coding Sequence
ATGTTTGAACAACAGATCAAAGCAGAGCCTATGAGcttTTACCCTCATCCCCATATAAACACTGGCCCCCCAACAATAATCCGTTCAGATACAAACCATGGTATTATTAACATGAATCAACACCATCCACAAGAAGATTCAAAAGATAGTCTTATAGTACAACACCAAGTACAACATCAACAGGAGCTGCTGGAACAGCACCAACAACATGATGAGTTAAATGAAGATGAAGTTGATAATtTAAGTTTCAAGGGCATGGAAGATGAAGGAGTTGAAATGGATATGGATGGCCGTGGCTGCCCTCAGGGTATGGGGGTTGACATGGGATCAGTTCAAACTAAAATGGAAATATCAAATGGTGGTCAAGTACCCAGATCCAAACCACAGGCCTGTAagGTCTGTGGAAAAGTTCTTTCATCTGCCTCATCTTACTATGTGCACATGAAGTTGCACTCAGGAAATAAACCCTTTCAATGCACGGTGTGTGATGCCGCATTCTGCCGCAAACCGTACCTTGAAGTACACATGCGCACGCACACCGGCGAGCGCCCCTTCCAATGCGACCTCTGCCTCAAACGCTTCACCCAAAAGTCAAGTCTTAATACGCACAAACGTGTACATACAGATGAGCACATGCGGGCTCTGATGGTGAAGGAGCGTCCCTACAAGTGTGAGCTCTGTCAGATGCGCTTCACGCAGAGTTCCAGCCTCAACAGACACAAGAAAATACATACGGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGCCGACATGGAAAAATACACACCGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCCTATCAATGTGACATCTGTGACAAGCGGTTCACGCAGAAGTCCAGCCTTGGCACTCATAAACGTATACACACCGGCGAGCGGCCCTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTACACGAAAAGATACATACGGAGACGCAAAAAAGCGGTCATGCGCTATCGACCGTGTTTCTAAATTGGGTACCGACGCCACCGGGCTCGGGGAGGTCGGGGAATTGGCAGCGGGCGGGAGTTGTAGAGATGTGTTGTTGTCGCAAGCGTCGGCGACGTGCGTTACTCGCTTTTGTGTGTGCACTGGGCGCAGTGCAAGGGCGACCTTACACGTGCGGGCGATGCCCCGCGGCGTTCGCCCGCCGGCCCTACTTGGACACTCACATGCGCACGCATACAGGCGAGCGGCCCTATCAGTGCGACGCGTGTCTCAAACGCTTCACGCAGAAGTCCAGCCTCAATATACATAAACGGACGCACACAGTCCAGGGCAGACCGTTCCAGTGCCTGTCCTGTCCCGCCGCCTTCACCTGCAAGCAATACCTGGAGATACACACGCGCACTCACACCGGCGAGCGCCCGTATCAGTGCGACATCTGCCTCAAGCGCTTCACGCAGAAGTCCAGTCTGAACATCCACAAGCGGACGCATTCGGTGCAGGGACGCCCGTTCCAGTGCCTGCAGTGCCCGGCCGCCTTCACCTGCAAGCAGTACCTCGAGATACACAACCGCACGCACACCGGCGAGCGCCCCTACCAGTGCGACGTCTGCCTCAAGAGATTCGCGCAAAAGTCCACACTCAACATACACAAACGAACGCACACAGTGCAAGGGCGGCCGTATCAGTGTATGGAGTGCCCGGCGGCGTTCACTTGCAAGCCGTACCTGGAAATACACATGCGCACGCACACTGGCGAGCGCCCCTTCGAGTGCGATGTGTGTTACAAACGCTTCACGCAGAAATCTACACTCAACATTCACAAGCGCATTCACACCGGGGAACGTCCATATGCATGTGATATTTGCCAAAAACGATTTGCAGTGAAAAGCTACGTAACAGCGCACAGATGGTCTCACGTTGCTGACAAGCCGCTGAACTGCGAGCGGTGCTCTATGACGTTCACGTCCAAGTCGCAGTTCGCTTTGCACATCCGCACGCACTCTAGCGGGCCCTGCTACGAGTGCAGTGTGTGCGGACGCACCTTCGTGCGAGATAGCTACCTCATACGACATCACAACCGCGTGCACCGGGAAAACCACAGCAACGTGTCGGCCAACAGCATCGGCACCATCAACAGTGTCGCCACCAACACTAATAATGGCGGCTTTGAGTCGCCCGGCGTTTGTGACCTCAGcTTCGTACCAATGGTGAATCGGTACATGACGTCGCAGGGGACACAAGTGTCGATGCAAGACACACAGAGCAAAATGTCGGCCATGTCGCCGCAGTCCATCGCATCTATTTCATCTCCGCCGCCGCCGCACACGCCCACGCCGCAGCCGCAGATGTCGATGCGCCTCGCTGATTGA
Protein Sequence
MFEQQIKAEPMSFYPHPHINTGPPTIIRSDTNHGIINMNQHHPQEDSKDSLIVQHQVQHQQELLEQHQQHDELNEDEVDNLSFKGMEDEGVEMDMDGRGCPQGMGVDMGSVQTKMEISNGGQVPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALMVKERPYKCELCQMRFTQSSSLNRHKKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTETQKSGHALSTVFLNWVPTPPGSGRSGNWQRAGVVEMCCCRKRRRRALLAFVCALGAVQGRPYTCGRCPAAFARRPYLDTHMRTHTGERPYQCDACLKRFTQKSSLNIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHMRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCERCSMTFTSKSQFALHIRTHSSGPCYECSVCGRTFVRDSYLIRHHNRVHRENHSNVSANSIGTINSVATNTNNGGFESPGVCDLSFVPMVNRYMTSQGTQVSMQDTQSKMSAMSPQSIASISSPPPPHTPTPQPQMSMRLAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00010401;
90% Identity
iTF_01508242;
80% Identity
-