Mpay011742.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Meandrusa payeni
Gene Symbol
-
Assembly
GCA_029286785.1
Location
JAGSMX010000019.1:6378224-6392934[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 8.9e-05 0.0072 17.2 0.1 3 23 129 149 128 149 0.97
2 19 8.1e-07 6.6e-05 23.6 1.2 1 23 155 177 155 177 0.99
3 19 5.1e-06 0.00041 21.1 2.7 1 23 183 205 183 205 0.99
4 19 2.9e-06 0.00024 21.8 2.2 1 23 220 242 220 242 0.98
5 19 0.00024 0.019 15.8 0.7 1 23 257 279 257 279 0.98
6 19 7.1e-05 0.0057 17.5 2.6 1 23 294 316 294 316 0.98
7 19 3.2e-07 2.6e-05 24.8 1.5 1 23 331 353 331 353 0.99
8 19 0.00014 0.012 16.5 2.8 1 23 359 381 359 381 0.98
9 19 1.6e-05 0.0013 19.5 0.4 1 23 388 410 388 410 0.99
10 19 1e-05 0.00082 20.1 2.1 1 23 416 438 416 438 0.99
11 19 0.033 2.6 9.1 1.8 1 23 445 467 445 467 0.98
12 19 5.5e-07 4.4e-05 24.1 2.3 1 23 473 495 473 495 0.99
13 19 0.038 3 8.9 1.8 1 23 502 524 502 524 0.98
14 19 2.2e-06 0.00018 22.2 1.5 1 23 530 552 530 552 0.99
15 19 0.00042 0.034 15.0 0.7 1 23 559 581 559 581 0.99
16 19 2.5e-06 0.0002 22.1 1.9 1 23 587 609 587 609 0.98
17 19 0.0018 0.15 13.1 0.3 1 20 615 634 615 637 0.93
18 19 4.2e-05 0.0034 18.2 1.2 2 23 644 665 643 665 0.96
19 19 3.2e-06 0.00026 21.7 1.4 1 23 671 694 671 694 0.97

Sequence Information

Coding Sequence
ATGTTTGAACAACAGATCAAAGCAGAACCTATgagTTTTTACAGCTCCCACTCACATGTGCACTCTGGTCTCCCCACGATAATCCGTTCAGACTCAAACCATGGTGTGTTAAATATGAACCAACACCACCACCAGGAAGATTCTAAAGATAGCCTCATAATACAACAAGTACAACACCAAGAGCTGCTGGAACAGCATCACCAACAACAAGATTTGCAAGCACAAGATGATGAGTTAAGTTTCAAAGGAATGGATGACGATGGCGTTGACATAGATATGGATGGTCGTCAGTGTTCacagGGCATGGGAGTGGACATGGTCACAGTTCAAACCAAAATGGAGGTGTCTAATGGGGGGCAAATATCTAGATCCAAACCACAGGCCTGTAAGGTTTGTGGCAAAGTTTTATCATCAGCATCTTCATATTATGTTCACATGAAGCTACACTCCGGAAATAAACCTTTTCAGTGCACGGTTTGCGACGCGGCTTTTTGTCGCAAGCCGTACCTGGAGGTGCACATGCGCACGCACACCGGCGAGAGGCCGTTCCAATGCGACCTCTGCCTTAAGCGATTCACACAGAAGTCAAGTCTCAACACGCACAAACGCGTCCACACCGATGAGCACATGCGCGCGTTGATGGTGAAGGAGCGGCCCTACCAGTGCGATCTCTGTCAGATGCGCTTCACGCAGAGCTCCAGCCTCAACCGACACAAGAAAATACACACGGAGGAACACAAACGCGCGCTGCTGGCTAAGGAACGTCCCTACCAGTGCGGCCTCTGCTATGTGCGATTCACCCAGAAATCGAGTTTGGGCCGGCACGGGAAAATACATACCGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACGTCTGTTTTATCCGCTTCACTCAGAAGTCCAGCCTGGGCCGACACGGCAAGATACACACTGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCCTATCAGTGCGACATCTGTGACAAGCGGTTCACGCAGAAGTCCAGCCTTGGCACTCATAAACGTATACACACCGGCGAGCGGCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAGATACATACGGTGCAAGGGCGTCCTTTCACGTGCGGGCAATGCCCGGCGGCCTTCGCCCGCCGCCCCCACCTGGACTCTCACATGCGCACGCACACAGGCGAGCGGCCCTATCAGTGCGACGCCTGTCTCAAGCGCTTCACGCAGAAGTCGAGCCTCAATATACATAAACGGACGCACACAGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGCCCCGCCGCCTTCACCTGCAAGCAATACCTGGAGATACACACGCGCACGCACACCGGCGAGCGCCCGTATCAGTGCGACATCTGCCTGAAGCGCTTCACGCAGAAGTCCAGTCTCAACATCCACAAGCGGACGCACTCAGTGCAGGGCCGCCCGTTCCAGTGCCTGCAGTGCCCGGCCGCCTTCACCTGCAAGCAGTACCTCGAGATACACAACCGCACGCACACCGGCGAGCGGCCCTACCAATGCGACGTGTGCCTCAAGAGATTCGCGCAAAAGTCTACACTCAATATAcacaaacgaacgcacacagTGCAAGGGCGGCCGTACCAATGTATGGAGTGCCCGGCCGCGTTCACTTGCAAGCCGTACCTGGAGATACACATGCGCACGCACACCGGCGAGCGCCCGTTCGAGTGCGATGTCTGTTACAAACGCTTCACGCAGAAATCCACACTCAACATCCACAAGCGAATCCACACTGgtgAACGGCCATATGCATGTGATATATGTCAGAAACGATTTGCTGTGAAGAGTTATGTAACAGCTCATAGGTGGTCACACGTGGCCGACAAGCCGCTGAACTGCGAGCGGTGCTCGTTGACGTTTACGTCCAAGTCGCAGTTCGCGCTGCACATCCGCACGCACTCCGCCACCTCCTGCTACGAGTGCAGTGTCTGCGGGCGTACCTTCGTGCGCGACAGCTATCTCATACGACACCACAACCGCGTGCATCGAGAGAACCATAGCAACATGTCGGCCAACAGCATCGGCACGATAACCGCCACCAACACCAACAACTCCAACAGCAACTACGACTCGCCCGGCGTATGTGACTTAAGTTTTGTGCCGATGGTCAATCGCTACATGACGTCTCAGGGAACGCAAGTGTCGATGCAGGACACAAGCAAAATGTCCTCCATGTCTCCCCAGTCCATCAGTTCCATTTCGTCGCCCCCGCCCCCCCACACGCCGACGCCGCAGCAGATGTCCAGTCAGATGCGTCTCACTGACTGA
Protein Sequence
MFEQQIKAEPMSFYSSHSHVHSGLPTIIRSDSNHGVLNMNQHHHQEDSKDSLIIQQVQHQELLEQHHQQQDLQAQDDELSFKGMDDDGVDIDMDGRQCSQGMGVDMVTVQTKMEVSNGGQISRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALMVKERPYQCDLCQMRFTQSSSLNRHKKIHTEEHKRALLAKERPYQCGLCYVRFTQKSSLGRHGKIHTEEHRRALLEKVRPYQCHVCFIRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTVQGRPFTCGQCPAAFARRPHLDSHMRTHTGERPYQCDACLKRFTQKSSLNIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHMRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCERCSLTFTSKSQFALHIRTHSATSCYECSVCGRTFVRDSYLIRHHNRVHRENHSNMSANSIGTITATNTNNSNSNYDSPGVCDLSFVPMVNRYMTSQGTQVSMQDTSKMSSMSPQSISSISSPPPPHTPTPQQMSSQMRLTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00010401;
90% Identity
iTF_00041088;
80% Identity
-