Cruf014177.1
Basic Information
- Insect
- Cerceris ruficornis
- Gene Symbol
- -
- Assembly
- GCA_963989415.1
- Location
- OZ022519.1:9471201-9474430[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.8e-13 2.4e-09 37.9 0.0 1 39 287 326 287 330 0.90 2 4 3e-12 7.5e-09 36.4 0.1 2 39 342 379 341 382 0.94 3 4 1.1e-18 2.7e-15 57.0 0.0 2 45 397 441 396 441 0.97 4 4 1.3e-18 3.1e-15 56.8 0.1 1 42 448 490 448 491 0.97
Sequence Information
- Coding Sequence
- ATGGGTTGTTCCGCATTTCATCTCTGCCATAATCCACGAACGCGGTATTCACTCTTGAAAACGGCTGACCAGCTGAAGATCAAGGGTCTCTGCGAGGTGCCGGAGAGCAGAGACGGTCCACCTTCGGTAAGCCTAAGTTCACCACCCAGAGAACCCGGCACACCTAGGATAAATTTCACAAAGCTGAAGAGACACCATCCCAGATATAAGAGGGCTAGAACCACGTTTGAGCCTCGCGCAACAGATTCCAGACATTACGACAGATACAAAGAAGAGGAAACGAACGAAAATTATAATCGTGAGAATAAGGAGAACCATAGAGACTGGCAGGCCGAAGATGAAGAGTGCACGgaggcagcagcagcagcagtagTCCTGGAAACTTGCCAACGTAACAACAACAACGGTAACGGTACAAACAACAATAATAACGGTGACATGTTCTGTCACACAGGACTTGGTCATTATGGTCATCATCCGGATCCTGGAGAGGTCGATCTACCCCCAGAGACACAACCTACACCACCAAGTGCCACTTTGGTTGGCACTACAATCACTCATCTAAGAGATCCGGATCACCATTCTACAGAGATTCAAAATTGTGACAGTGTAAAAATAAAGTTCGAAACGTTACATACGATGGATTCCTCGGATACCATTGATATCGATAGCCACATGTCAGATCGGGCAAGTGTGAGTTCAAAGCACGCGGCCGACAGTGACAACATGATGATGATCACTCCGGAATTACTTGGCCTGATGCCCTCTGGAAGCTCTGTTCACTCAGATTCCGGAGAAAATAATTCAAGGGGGCATTCTGGACAATCGAGTTCGCACCACCATGGTTCTAAATCATGGACTCAAGAAGATATGGATGCTGCTTTGGAGGCGTTGAGAAATCATGACATGAGCCTAACGAAAGCGTCGGCAACGTTTGGCATTCCCTCGACAACTCTATGGCAAAGAGCGCATCGACTGGGCATTGACACACCAAAAAAAGACGGACCAACAAAATCGTGGAGTGATGAAAGTTTAAATAACGCGCTCGAAGCGTTACGAACTGGAACAATCTCTGCAAATAAAGCGTCAAAAGCGTTTGGAATACCTTCGAGTACGTTATACAAAATTGCAAGGAGAGAAGGTATTAGACTGGCAGCACCTTTTAATGCAAGTCCTACAACTTGGTCACCTGCTGACCTGGATCGAGCTTTAGAAGCAATACGATCTGGGCAAACATCCGTGCAAAGGGCATCCACAGAATTTGGTATACCAACGGGGACGTTATACGGAAGATGCAAAAGGGAAGGCATCGAACTTAGCAGAAGTAACCCTACACCATGGAGCGAAGACGCCATGACTGAAGCTTTAGAAGCTGTGAGaTTGGGTCATATGAGCATCAATCAGGCAGCTATTCATTACAATCTACCATACTCGTCTTTATACGGTCGTTTCAAGAGGGGGAAATATGAAGAACCAGCTGTCGTTGATATTTCACAGGATGGCAGCAGTCCACATTTCCATCAAAGTCCAAATCAGAATCATTCGACTGCCGTTCCAGATCAAATGCCATATCAAGGCAGCTGA
- Protein Sequence
- MGCSAFHLCHNPRTRYSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRARTTFEPRATDSRHYDRYKEEETNENYNRENKENHRDWQAEDEECTEAAAAAVVLETCQRNNNNGNGTNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPAVVDISQDGSSPHFHQSPNQNHSTAVPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01391873; iTF_00762466; iTF_01419554; iTF_01418916; iTF_01420850; iTF_01418266; iTF_00393512; iTF_01392681; iTF_01393417; iTF_00438668; iTF_01123149; iTF_01122986; iTF_01394194; iTF_00010999; iTF_01213236; iTF_01214692; iTF_00024535; iTF_00233143; iTF_00229943; iTF_00863866; iTF_01389339; iTF_01391004; iTF_01390110; iTF_00219711; iTF_01514073; iTF_00302943; iTF_01497312; iTF_00414214; iTF_00343090; iTF_01100498; iTF_00652600;
- 90% Identity
- iTF_00183202; iTF_01070949; iTF_01453991; iTF_01066857; iTF_01069569; iTF_01070274; iTF_01068199; iTF_01067529; iTF_01066158; iTF_01067702; iTF_01067032; iTF_01068888; iTF_00393512; iTF_00302943; iTF_00961739; iTF_00862476; iTF_00763150; iTF_00962420; iTF_00024535; iTF_00233143; iTF_00229943; iTF_00863866; iTF_01169082; iTF_00864553; iTF_00865230; iTF_00863187; iTF_00625590; iTF_00625413; iTF_00861046; iTF_00360823; iTF_00360994; iTF_00360127; iTF_00861791; iTF_00865920; iTF_01539517; iTF_01498110; iTF_00219711; iTF_01514073; iTF_00963103; iTF_00964383; iTF_00086080; iTF_00085505; iTF_00087845; iTF_00087015; iTF_00088139; iTF_00085198; iTF_00084658; iTF_00088694; iTF_00084443; iTF_00087291; iTF_00675936;
- 80% Identity
- -